Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
POLE3Q9NRF9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
POLE3Q9NRF9 HMGN1P30-201ENST00000589286 268 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 AC234772.3-201ENST00000602277 528 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 AC112191.3-201ENST00000604371 277 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 AL670379.2-201ENST00000604983 252 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 AL670379.4-201ENST00000605279 254 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 AC098614.4-201ENST00000607601 462 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 SDR42E1P4-201ENST00000620894 481 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 ZNF702P-202ENST00000434269 1966 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
POLE3Q9NRF9 AL365361.1-201ENST00000566942 3481 ntBASIC2.14□□□□□ -2.07
POLE3Q9NRF9 HAUS6P2-201ENST00000433254 2404 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 RNY1P12-201ENST00000364251 105 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 SNORA72.3-201ENST00000365074 132 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 RNU6-487P-201ENST00000365430 104 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 SNORA24.1-201ENST00000384401 135 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 MIR558-201ENST00000384920 94 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AL356583.2-201ENST00000426536 280 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 TOMM20P4-201ENST00000427861 435 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 MED13P1-201ENST00000428342 171 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 DNAJC19P4-201ENST00000440115 345 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AC091965.2-201ENST00000512324 613 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 Y_RNA.687-201ENST00000516558 91 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 APOOP1-201ENST00000604695 592 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AC025034.2-201ENST00000623264 286 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 SCARNA4-202ENST00000625402 129 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 AL157786.1-207ENST00000627771 695 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 CENPCP1-201ENST00000533085 2578 ntBASIC2.13□□□□□ -2.07
POLE3Q9NRF9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
POLE3Q9NRF9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 U3.12-201ENST00000364498 214 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 PGBD4P6-201ENST00000421501 610 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 SRIP2-201ENST00000428470 166 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 RPS15AP28-201ENST00000435088 386 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 EPS15P1-201ENST00000448836 336 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC006026.2-201ENST00000457376 180 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 Y_RNA.672-201ENST00000516289 104 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 RNU6-667P-201ENST00000517186 102 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AP001646.1-201ENST00000527936 915 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC022878.1-201ENST00000530684 149 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC078814.3-201ENST00000553036 491 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC008749.1-201ENST00000597650 306 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 AC026790.2-201ENST00000606282 430 ntBASIC2.12□□□□□ -2.07
POLE3Q9NRF9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 OR4G2P-201ENST00000328113 903 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 RNU6-655P-201ENST00000362858 107 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 MIR578-201ENST00000384828 96 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 RPS3AP36-201ENST00000398190 775 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 RNU2-8P-201ENST00000410727 190 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 UBE2D3P4-201ENST00000441973 436 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AL137159.1-201ENST00000452808 512 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 RNA5SP233-201ENST00000459153 113 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 RBBP4P6-201ENST00000508098 202 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.11□□□□□ -2.07
POLE3Q9NRF9 AC046143.2-201ENST00000609789 160 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms