Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RTN4Q9NQC3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTN4Q9NQC3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTN4Q9NQC3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 snoU2_19.1-201ENST00000362361 80 ntBASIC6.12□□□□□ -1.43
RTN4Q9NQC3 Y_RNA.590-201ENST00000410140 107 ntBASIC6.12□□□□□ -1.43
RTN4Q9NQC3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 TGIF1P1-201ENST00000558095 802 ntBASIC6.12□□□□□ -1.43
RTN4Q9NQC3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 MIR6780B-201ENST00000610307 79 ntBASIC6.12□□□□□ -1.43
RTN4Q9NQC3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
RTN4Q9NQC3 AC010329.5-201ENST00000623497 2174 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 MAPK10-322ENST00000641485 4530 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RNA5SP273-201ENST00000362484 113 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RNU1-150P-201ENST00000362491 162 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RNA5SP28-201ENST00000363841 119 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 Y_RNA.199-201ENST00000364014 102 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RNA5-8SP4-201ENST00000365096 150 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 SNORA18.2-201ENST00000383865 132 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 Y_RNA.446-201ENST00000384178 104 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 SNORD96B-201ENST00000386148 79 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 AC007161.1-204ENST00000423039 460 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 AC009414.1-201ENST00000427200 443 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 TOMM22P2-201ENST00000430735 237 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 Z75741.1-201ENST00000446793 314 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 SCARNA10-201ENST00000459255 330 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RNU6-107P-201ENST00000516643 102 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 RPL7P50-201ENST00000600588 727 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 MIR7157-201ENST00000635801 60 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 U6.98-201ENST00000637157 84 ntBASIC6.11□□□□□ -1.43
RTN4Q9NQC3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RTN4Q9NQC3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
RTN4Q9NQC3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTN4Q9NQC3 AC016588.2-201ENST00000632484 3021 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 MIR549A-201ENST00000385268 96 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 AL009179.1-201ENST00000406085 265 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 RNU2-14P-201ENST00000411053 191 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 RNU2-61P-201ENST00000411069 191 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC6.1□□□□□ -1.43
RTN4Q9NQC3 SEM1P1-201ENST00000506694 209 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 AC108043.1-201ENST00000512696 574 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 RNA5SP438-201ENST00000516561 112 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC6.1□□□□□ -1.43
RTN4Q9NQC3 AL359091.2-201ENST00000609303 556 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.1□□□□□ -1.43
RTN4Q9NQC3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
RTN4Q9NQC3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTN4Q9NQC3 SCARNA15-201ENST00000607520 4325 ntBASIC6.1□□□□□ -1.43
RTN4Q9NQC3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 SNORA64.1-201ENST00000362600 132 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 SNORD56.6-201ENST00000384569 71 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 HMGN2P8-201ENST00000391458 268 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 PIGPP3-201ENST00000425307 415 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 AC091959.1-201ENST00000495857 238 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 RNU6-155P-201ENST00000516347 100 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 AP000648.1-201ENST00000529682 397 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 RPL21P7-201ENST00000557463 483 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 AC022655.2-201ENST00000577280 318 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 MIR3154-201ENST00000577829 84 ntBASIC6.09□□□□□ -1.43
RTN4Q9NQC3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RTN4Q9NQC3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RTN4Q9NQC3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RTN4Q9NQC3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RTN4Q9NQC3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC6.09□□□□□ -1.44
RTN4Q9NQC3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.82-201ENST00000363000 102 ntBASIC6.08□□□□□ -1.44
RTN4Q9NQC3 Y_RNA.92-201ENST00000363043 102 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms