Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL353997.5-201ENST00000618886 171 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 RNU6-533P-201ENST00000384144 107 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC023194.1-201ENST00000493084 308 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC117522.2-201ENST00000510049 657 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 Y_RNA.717-201ENST00000517106 92 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC022616.6-201ENST00000520479 119 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AP006587.4-201ENST00000526053 529 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AP003181.2-201ENST00000528941 181 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 RPS3AP4-201ENST00000555161 764 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC008015.1-201ENST00000555505 465 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AL031274.2-201ENST00000599419 203 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 Z99289.3-201ENST00000605586 594 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC096772.1-201ENST00000609146 564 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC103710.2-201ENST00000609912 942 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 AC138627.2-201ENST00000624202 601 ntBASIC2.11□□□□□ -2.07
TM9SF3Q9HD45 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 RNU6-501P-201ENST00000364072 100 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 MIR301A-201ENST00000385261 86 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 RNU6-817P-201ENST00000391083 104 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 FCF1P10-201ENST00000407590 479 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC127391.1-201ENST00000411737 98 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 ELOCP17-201ENST00000414751 326 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC007283.2-201ENST00000424739 197 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AL445646.1-201ENST00000431784 216 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 RPL22P17-201ENST00000438729 315 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AL512286.1-201ENST00000439244 400 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 NEFMP1-201ENST00000443423 1006 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AL590365.1-201ENST00000450788 243 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 RNU6-1003P-201ENST00000517099 105 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC026271.5-201ENST00000577873 130 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 MIR3118-1-201ENST00000581787 76 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 MIR548AB-201ENST00000584917 84 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC008749.1-201ENST00000597650 306 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 KC877982.1-201ENST00000602313 470 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC112187.2-201ENST00000604345 283 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC004223.4-201ENST00000612426 332 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AC005296.1-201ENST00000616145 209 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 AL589994.2-201ENST00000621124 579 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 ZNF702P-202ENST00000434269 1966 ntBASIC2.1□□□□□ -2.07
TM9SF3Q9HD45 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AP000568.1-201ENST00000282964 442 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 HSPE1P11-201ENST00000339579 310 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 RNU5F-7P-201ENST00000363696 115 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 RNU6-188P-201ENST00000364207 107 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 MIR676-201ENST00000390702 67 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 U8.13-201ENST00000390842 128 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 OR51A5P-201ENST00000415429 942 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 RPS15AP12-201ENST00000419498 388 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 KATNBL1P6-201ENST00000453433 915 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 SSXP1-201ENST00000453640 473 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AC011005.2-201ENST00000487324 359 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 SNORA4.4-201ENST00000515921 135 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 RNU5B-3P-201ENST00000516601 115 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 RNU6-572P-201ENST00000516724 80 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 RNU6-295P-201ENST00000516901 104 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 SNORA48.11-201ENST00000517015 89 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AC107953.1-201ENST00000522216 297 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 PCMTD1P2-201ENST00000565017 355 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 LRRC37A5P-203ENST00000580181 585 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AC090616.2-202ENST00000584248 222 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 WISP1-OT1-201ENST00000602893 642 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AL109918.3-201ENST00000603072 338 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AL670379.10-201ENST00000604330 253 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AC007363.1-201ENST00000604736 620 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AL670379.9-201ENST00000605428 253 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 AC018638.7-201ENST00000605836 1114 ntBASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms