Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 AC009093.8-201ENST00000641769 292 ntBASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
AMBRA1Q9C0C7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 AC007656.2-201ENST00000624902 4547 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-490P-201ENST00000362985 107 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 Y_RNA.145-201ENST00000363527 102 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-1059P-201ENST00000363752 98 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 SNORD14B-201ENST00000364533 90 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 DEFB109C-201ENST00000382575 264 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 DEFB109B-201ENST00000382656 264 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-842P-201ENST00000384269 107 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 Y_RNA.463-201ENST00000384271 102 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-166P-201ENST00000384371 107 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-140P-201ENST00000384566 108 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 HSPE1P26-201ENST00000405341 275 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 U3.42-201ENST00000408746 214 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 AC093578.1-201ENST00000415219 368 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 BX679664.1-201ENST00000434429 253 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-1037P-201ENST00000459571 107 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNA5SP384-201ENST00000516615 116 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-572P-201ENST00000516724 80 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-307P-201ENST00000516743 106 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 AC008737.2-201ENST00000599446 118 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 Z69720.2-201ENST00000624755 279 ntBASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
AMBRA1Q9C0C7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-1115P-201ENST00000362490 106 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 SNORD6-201ENST00000365444 73 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 MIR10A-201ENST00000385043 110 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 SNORD56-201ENST00000413522 71 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC007560.1-201ENST00000426912 237 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC093151.1-201ENST00000427711 313 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 TOMM20P4-201ENST00000427861 435 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC092573.2-201ENST00000434546 243 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC092798.1-201ENST00000458542 409 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 SCARNA16.2-201ENST00000516520 172 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 RN7SKP295-201ENST00000517264 153 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 CASP1P1-201ENST00000526345 212 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC083806.3-201ENST00000614016 455 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AL034408.1-202ENST00000636088 415 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 AC068647.1-201ENST00000489539 2265 ntBASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
AMBRA1Q9C0C7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 FTLP6-201ENST00000355274 422 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 Y_RNA.252-201ENST00000364556 101 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-596P-201ENST00000365395 98 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-790P-201ENST00000384479 105 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 SNORA41-201ENST00000384675 132 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 MIR30B-201ENST00000384850 88 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RN7SKP156-201ENST00000410308 342 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-325P-201ENST00000411132 105 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AL591419.1-201ENST00000427423 339 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RPL23AP50-201ENST00000434149 455 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RPL21P23-201ENST00000446654 460 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RPL21P104-201ENST00000464143 478 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AC113155.1-201ENST00000511141 769 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 RNU6-264P-201ENST00000517134 104 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 TRAV32-201ENST00000553993 340 ntBASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.36□□□□□ -1.87
AMBRA1Q9C0C7 AP001836.1-201ENST00000604675 523 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms