Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AP001642.1-201ENST00000624727 2117 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 AL034408.1-202ENST00000636088 415 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 U6.105-201ENST00000637379 88 ntBASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COL25A1Q9BXS0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 AC022164.1-201ENST00000568767 2673 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 AL353743.1-202ENST00000431724 1695 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 Y_RNA.35-201ENST00000362601 101 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 RNU6-137P-201ENST00000363680 108 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 Y_RNA.294-201ENST00000364916 102 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 U8.10-201ENST00000384260 133 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 Y_RNA.595-201ENST00000410403 105 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 ZNF192P1-203ENST00000565888 810 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 AL606490.9-201ENST00000603331 271 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 AL670379.3-201ENST00000605040 251 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 MIR3651-201ENST00000630427 90 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 MIR6844-201ENST00000637122 62 ntBASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL25A1Q9BXS0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 RNU6-294P-201ENST00000364999 102 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 RNA5SP223-201ENST00000365174 120 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 RNU5E-7P-201ENST00000365290 117 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 SNORD116-21-201ENST00000384507 92 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 MIR626-201ENST00000385032 94 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 RNA5SP56-201ENST00000410277 118 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AL450023.3-201ENST00000440592 271 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 LINC02210-201ENST00000444561 288 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AL031737.1-201ENST00000450125 223 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 BX276092.4-201ENST00000452056 248 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 RN7SL441P-201ENST00000492388 296 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AC123786.2-201ENST00000603459 275 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AL161798.1-201ENST00000604630 131 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AC113403.1-201ENST00000604910 193 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 ZNF702P-202ENST00000434269 1966 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 AC008079.2-201ENST00000623543 20396 ntBASIC4.69□□□□□ -1.66
COL25A1Q9BXS0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AC068700.1-201ENST00000565862 3754 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 RNU6-1167P-201ENST00000363227 94 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 SNORA36C-201ENST00000384289 132 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 RNU6-768P-201ENST00000384683 107 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 Z98745.1-201ENST00000402553 494 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AL513331.1-201ENST00000411908 397 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 EIF1AXP1-201ENST00000419267 435 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AC009238.2-201ENST00000431026 355 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 HMGN2P31-201ENST00000432430 273 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AC124916.1-201ENST00000444020 547 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 SCARNA8-201ENST00000515924 131 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 TVP23BP1-201ENST00000557500 617 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AL137843.1-201ENST00000605078 385 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 AL078604.3-201ENST00000615580 211 ntBASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL25A1Q9BXS0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 GVINP1-202ENST00000531871 7271 ntBASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL25A1Q9BXS0 RNU6-643P-201ENST00000384018 107 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms