Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC093899.1-201ENST00000457984 376 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AL139824.2-201ENST00000458731 1095 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AC007182.2-201ENST00000489251 402 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNU6-914P-201ENST00000516749 109 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNU6-677P-201ENST00000516914 101 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RNU6-1315P-201ENST00000517187 99 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 MIR1273C-201ENST00000578669 77 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 MIR4255-201ENST00000579351 72 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AC022893.3-201ENST00000607665 437 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 AC097478.2-201ENST00000610572 514 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.27□□□□□ -2.21
UPK3BQ9BT76 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.27□□□□□ -2.21
UPK3BQ9BT76 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 Y_RNA.33-201ENST00000362591 102 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 RNU4-92P-201ENST00000363783 136 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 RNU4-42P-201ENST00000364738 142 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 RNY3P13-201ENST00000365542 102 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 RNU6-166P-201ENST00000384371 107 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 Y_RNA.534-201ENST00000384599 112 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 RNU6-482P-201ENST00000391068 107 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 MTCO2P20-201ENST00000437339 673 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC104564.1-201ENST00000493028 407 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC023050.2-201ENST00000544968 387 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC015712.3-201ENST00000559380 164 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC136619.2-201ENST00000563361 631 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AL356432.3-201ENST00000568952 465 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC024614.2-201ENST00000577584 372 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 MIR3146-201ENST00000580367 79 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 MIR3124-201ENST00000582636 67 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC073410.2-201ENST00000603240 332 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC174048.1-201ENST00000603389 144 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AL158042.1-201ENST00000605338 460 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC021646.1-201ENST00000605469 484 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.26□□□□□ -2.21
UPK3BQ9BT76 AC092656.1-203ENST00000624134 423 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 ZNF72P-201ENST00000425869 1908 ntBASIC1.26□□□□□ -2.21
UPK3BQ9BT76 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC008267.5-201ENST00000424928 265 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 USP9YP24-201ENST00000434374 697 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 PTENP1-201ENST00000447117 1215 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC006512.1-201ENST00000468816 291 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 BZW1P2-201ENST00000473537 826 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC109927.2-201ENST00000506416 303 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 RNU2-53P-201ENST00000516257 147 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 RNU6-667P-201ENST00000517186 102 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC109329.1-201ENST00000518744 317 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AP005639.2-201ENST00000527592 928 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AL157871.3-201ENST00000557231 293 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 MIR3683-201ENST00000580847 82 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC106052.1-201ENST00000608029 497 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC093788.1-201ENST00000609356 927 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC130324.3-201ENST00000614165 542 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 MIR3529-201ENST00000637713 78 ntBASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK3BQ9BT76 AC092104.1-201ENST00000497346 1441 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 SNORD115-3-201ENST00000363100 82 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 RNU6-433P-201ENST00000363216 104 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 RNU6-395P-201ENST00000365662 106 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 SMIM11P1-201ENST00000369586 178 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 SNORA8-201ENST00000384574 139 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 MIR9-3-201ENST00000385084 90 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 MIR764-201ENST00000390811 85 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 SNORA40.18-201ENST00000391200 128 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 MIR1294-201ENST00000408503 142 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK3BQ9BT76 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK3BQ9BT76 AC006366.1-201ENST00000422002 759 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK3BQ9BT76 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK3BQ9BT76 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.24□□□□□ -2.21
UPK3BQ9BT76 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK3BQ9BT76 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.24□□□□□ -2.21
UPK3BQ9BT76 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 AL031313.1-201ENST00000448435 256 ntBASIC1.24□□□□□ -2.21
UPK3BQ9BT76 EXOSC3P1-201ENST00000448649 500 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms