Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 RPS26P55-201ENST00000471178 356 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC093809.1-201ENST00000509155 340 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC087441.2-201ENST00000529141 262 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 TRAV32-201ENST00000553993 340 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 DNAJC19P9-201ENST00000555084 351 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC012414.6-201ENST00000568241 401 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC122134.1-202ENST00000569111 1201 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 MIR3660-201ENST00000584845 100 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC009977.1-201ENST00000586015 570 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC021171.1-201ENST00000603137 706 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AL353770.2-201ENST00000620024 78 ntBASIC0.71□□□□□ -2.3
LIMD2Q9BT23 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.71□□□□□ -2.3
LIMD2Q9BT23 MTND5P9-201ENST00000503854 1755 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 RNU6-512P-201ENST00000364438 103 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 MTCO3P5-201ENST00000433620 714 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL158053.1-201ENST00000441503 453 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL035666.1-201ENST00000446195 348 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 RNU6-775P-201ENST00000459318 96 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC087477.1-201ENST00000465747 340 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL121594.1-201ENST00000475906 575 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC104563.1-201ENST00000476147 376 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 RNVU1-2-201ENST00000516326 135 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 RN7SKP219-201ENST00000516825 296 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AP005660.1-201ENST00000522972 293 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AP003392.2-201ENST00000527269 208 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AP003122.4-201ENST00000530980 758 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 SLC2A13P1-201ENST00000531560 322 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 OR6C7P-201ENST00000547875 934 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 MIR4782-201ENST00000577987 79 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC104984.5-201ENST00000586878 94 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC023043.2-201ENST00000589678 1026 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 BBIP1P1-201ENST00000602999 279 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL583856.2-201ENST00000606298 543 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC103810.9-201ENST00000606688 112 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 MIR8084-201ENST00000614105 89 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AL121890.5-201ENST00000620848 304 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC099063.3-201ENST00000642066 185 ntBASIC0.7□□□□□ -2.3
LIMD2Q9BT23 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.7□□□□□ -2.3
LIMD2Q9BT23 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 Y_RNA.99-201ENST00000363138 105 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 RNU6-457P-201ENST00000363999 107 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 SNORA62.1-201ENST00000364287 154 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 RNU6-439P-201ENST00000384188 106 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AL133475.1-201ENST00000404414 305 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AL591704.2-201ENST00000421658 181 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 RPL39P29-201ENST00000447779 157 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC004223.1-201ENST00000479840 271 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AL163540.1-201ENST00000485382 386 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC010409.1-201ENST00000487382 476 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 RPS23P4-201ENST00000487908 423 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 RNU2-53P-201ENST00000516257 147 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 RNU6-390P-201ENST00000516259 103 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 RN7SKP256-201ENST00000517201 314 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC093249.1-201ENST00000567049 203 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC002400.1-201ENST00000569310 726 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 MIR4303-201ENST00000581299 66 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AP001981.2-201ENST00000603241 418 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC090970.3-201ENST00000612566 866 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 uc_338.12-201ENST00000616344 181 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC097460.3-201ENST00000623099 442 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 AC090517.3-201ENST00000625170 141 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 U6.99-201ENST00000637524 83 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 MTND4P21-201ENST00000453886 1357 ntBASIC0.69□□□□□ -2.3
LIMD2Q9BT23 MIR378A-201ENST00000362177 66 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 SNORD1A-201ENST00000364968 72 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 RNU6-1274P-201ENST00000384557 107 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 MIR186-201ENST00000384988 86 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.68□□□□□ -2.3
LIMD2Q9BT23 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms