Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AC137627.1-201ENST00000545761 289 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 MIR5695-201ENST00000579717 85 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 MIR7853-201ENST00000584820 132 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AL139124.1-201ENST00000609123 421 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AC006065.5-201ENST00000623427 349 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 CR381572.2-201ENST00000624852 397 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AL356489.2-201ENST00000566968 3528 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 AC068700.1-201ENST00000565862 3754 ntBASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CNTNAP3BQ96NU0 OR56B2P-202ENST00000641377 2453 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 Y_RNA.294-201ENST00000364916 102 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-407P-201ENST00000365280 104 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 MIR34A-201ENST00000385130 110 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-1248P-201ENST00000391096 64 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 HLFP1-201ENST00000402375 499 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 NDUFB4P4-201ENST00000404822 243 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 Y_RNA.595-201ENST00000410403 105 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-1199P-201ENST00000411249 104 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 RAB9AP3-201ENST00000412737 573 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 CYCSP32-201ENST00000440548 321 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 RAB9AP1-201ENST00000449393 573 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 FABP5P15-201ENST00000453566 214 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 RN7SL303P-201ENST00000469773 251 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 ZNF192P1-203ENST00000565888 810 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 AL357075.2-201ENST00000614906 189 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 AC007390.2-201ENST00000606229 3803 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 ZNF702P-202ENST00000434269 1966 ntBASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.73□□□□□ -1.65
CNTNAP3BQ96NU0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 SPRR2C-201ENST00000290702 219 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 Y_RNA.101-201ENST00000363154 102 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 MIR626-201ENST00000385032 94 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 RNU6-763P-201ENST00000390865 106 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 NDUFB4P8-201ENST00000435351 367 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 RNA5SP103-201ENST00000459503 118 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 UBL5P4-201ENST00000562584 236 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 RN7SL356P-201ENST00000582228 248 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 IPO5P1-202ENST00000600039 287 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 DEFB117-201ENST00000602356 141 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AC007179.3-201ENST00000604976 235 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AL591034.3-201ENST00000605511 685 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AL138721.1-201ENST00000616756 179 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AC015726.2-201ENST00000620112 122 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AC025521.1-201ENST00000621624 286 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AL034408.1-202ENST00000636088 415 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 MIR6844-201ENST00000637122 62 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AC009541.1-201ENST00000438279 2662 ntBASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
CNTNAP3BQ96NU0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
CNTNAP3BQ96NU0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 OR51H2P-202ENST00000641424 3046 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 RNA5SP326-201ENST00000363209 110 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-768P-201ENST00000384683 107 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-541P-201ENST00000384709 110 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-159P-201ENST00000391080 106 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 PPIAP31-201ENST00000405422 495 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 RNU6-588P-201ENST00000410281 105 ntBASIC4.71□□□□□ -1.66
CNTNAP3BQ96NU0 Y_RNA.630-201ENST00000411370 108 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms