Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-CQ95604 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-CQ95604 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-CQ95604 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-CQ95604 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
HLA-CQ95604 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-CQ95604 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-CQ95604 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-CQ95604 Y_RNA.420-201ENST00000384043 110 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 MIR124-3-201ENST00000384866 87 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 MIR626-201ENST00000385032 94 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 FTH1P15-201ENST00000406984 280 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 RNU6-710P-201ENST00000410424 105 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 RNU4-57P-201ENST00000515980 135 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 RN7SKP179-201ENST00000516126 217 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 RNU6-436P-201ENST00000516171 114 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 CYCSP26-201ENST00000534107 320 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 NACAP3-201ENST00000552100 481 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 AC005520.5-201ENST00000613926 164 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 RNA5SP196-201ENST00000625967 102 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 AC104260.2-201ENST00000623551 3497 ntBASIC5.06□□□□□ -1.6
HLA-CQ95604 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-CQ95604 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-CQ95604 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-CQ95604 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HLA-CQ95604 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HLA-CQ95604 AC006206.1-201ENST00000544842 3387 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-CQ95604 AC134026.1-201ENST00000623249 2239 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-CQ95604 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-CQ95604 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-CQ95604 SNORA18.3-201ENST00000384122 132 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 AL355497.1-201ENST00000406262 551 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 U3.40-201ENST00000408706 208 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 TOMM22P1-201ENST00000418578 312 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 NDUFB4P8-201ENST00000435351 367 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 AL358232.1-201ENST00000448030 501 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-CQ95604 RN7SL814P-201ENST00000487715 300 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-CQ95604 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-CQ95604 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-CQ95604 FTH1P11-201ENST00000517577 551 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 AC109810.1-201ENST00000534066 224 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-CQ95604 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-CQ95604 MIR3646-201ENST00000578301 84 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-CQ95604 AL354798.1-201ENST00000622505 329 ntBASIC5.05□□□□□ -1.6
HLA-CQ95604 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-CQ95604 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-CQ95604 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-CQ95604 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-CQ95604 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-CQ95604 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
HLA-CQ95604 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-CQ95604 Z73965.1-201ENST00000623412 2297 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-CQ95604 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-CQ95604 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-CQ95604 RNU6-799P-201ENST00000363567 107 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 Y_RNA.287-201ENST00000364853 94 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 GNG5P2-201ENST00000372054 207 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 RN7SKP202-201ENST00000410439 330 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 CTSL3P-202ENST00000412179 788 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-CQ95604 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-CQ95604 AC012308.1-201ENST00000451232 178 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 UQCRHP4-201ENST00000471686 272 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 RNU6-1234P-201ENST00000516877 103 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 CYP4A27P-201ENST00000567218 190 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-CQ95604 MIR3136-201ENST00000583498 78 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 AC024220.1-201ENST00000603675 484 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 AL391903.3-201ENST00000612158 163 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 AL023881.1-201ENST00000621088 301 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-CQ95604 AC106871.1-201ENST00000568324 3102 ntBASIC5.04□□□□□ -1.6
HLA-CQ95604 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-CQ95604 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-CQ95604 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HLA-CQ95604 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-CQ95604 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-CQ95604 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-CQ95604 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-CQ95604 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-CQ95604 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-CQ95604 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-CQ95604 Y_RNA.43-201ENST00000362670 111 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 RNU6-525P-201ENST00000363685 104 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 SNORA7.2-201ENST00000364446 145 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 MIR325-201ENST00000385260 98 ntBASIC5.03□□□□□ -1.6
HLA-CQ95604 MIR616-201ENST00000385293 97 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms