Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
TOPBP1Q92547 BTF3P8-201ENST00000414577 526 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC007435.1-201ENST00000421086 415 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 SKA2P1-201ENST00000425592 390 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 ELOCP14-201ENST00000428070 331 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 NANOGP2-201ENST00000435391 727 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.34□□□□□ -2.2
TOPBP1Q92547 ELOCP7-201ENST00000439968 331 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 RPL23AP6-201ENST00000446637 472 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.34□□□□□ -2.2
TOPBP1Q92547 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC087884.1-201ENST00000469738 328 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TOPBP1Q92547 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC133485.1-201ENST00000567176 124 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC138907.6-201ENST00000568401 126 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.34□□□□□ -2.2
TOPBP1Q92547 AL583856.2-201ENST00000606298 543 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 MIR2909-201ENST00000617113 69 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC253576.2-201ENST00000618815 580 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC024581.2-201ENST00000619986 252 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 AC007490.1-201ENST00000624321 703 ntBASIC1.34□□□□□ -2.2
TOPBP1Q92547 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
TOPBP1Q92547 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TOPBP1Q92547 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
TOPBP1Q92547 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOPBP1Q92547 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TOPBP1Q92547 Y_RNA.245-201ENST00000364493 95 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 RNA5SP240-201ENST00000365355 128 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 AL356421.1-201ENST00000403255 413 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 AL022238.1-201ENST00000442557 355 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TOPBP1Q92547 MIR3167-201ENST00000579623 85 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.33□□□□□ -2.2
TOPBP1Q92547 AC096720.1-201ENST00000604441 183 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 AL773524.1-201ENST00000614065 229 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 MIR8084-201ENST00000614105 89 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 AP003400.5-201ENST00000624827 617 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 AC090517.3-201ENST00000625170 141 ntBASIC1.33□□□□□ -2.2
TOPBP1Q92547 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.33□□□□□ -2.2
TOPBP1Q92547 RNU6-19P-201ENST00000384718 107 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 CISD1P1-201ENST00000393907 327 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 RNU2-42P-201ENST00000410697 113 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 MTND1P21-201ENST00000412991 285 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 TPMTP2-201ENST00000414372 726 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.32□□□□□ -2.2
TOPBP1Q92547 AL353689.1-201ENST00000438895 199 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 SEPT14P24-201ENST00000447236 180 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 CECR9-201ENST00000453421 199 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.32□□□□□ -2.2
TOPBP1Q92547 AC107953.1-201ENST00000522216 297 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 AL357094.1-201ENST00000603845 844 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 AC120349.2-201ENST00000625002 298 ntBASIC1.32□□□□□ -2.2
TOPBP1Q92547 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
TOPBP1Q92547 RNU6-486P-201ENST00000363116 107 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 U3.13-201ENST00000364804 214 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 RNU2-63P-201ENST00000410792 194 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AL160275.3-201ENST00000423876 471 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 DPRXP1-201ENST00000426312 460 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC092634.2-201ENST00000428146 1010 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 HMGN2P10-201ENST00000448085 265 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 RPL22P13-201ENST00000493291 347 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC093752.1-206ENST00000511823 336 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 RNA5SP112-201ENST00000515937 99 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC012435.1-202ENST00000568772 240 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AL445435.1-201ENST00000604232 665 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AL138478.1-201ENST00000612252 832 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC003001.2-201ENST00000616294 831 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC009233.1-201ENST00000616477 371 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC009268.2-201ENST00000621925 457 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AL118508.4-201ENST00000624142 1176 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.31□□□□□ -2.2
TOPBP1Q92547 AC107982.1-201ENST00000507171 1300 ntBASIC1.31□□□□□ -2.2
TOPBP1Q92547 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TOPBP1Q92547 HMGN2P39-201ENST00000398005 273 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 NDUFS5P1-201ENST00000405668 289 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 BX119904.4-201ENST00000424402 301 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AL158053.1-201ENST00000441503 453 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 MTND1P9-201ENST00000453775 944 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC114981.1-201ENST00000503897 678 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 RNU6-714P-201ENST00000516963 103 ntBASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.3□□□□□ -2.2
TOPBP1Q92547 MIR4299-201ENST00000577899 72 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms