Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU4-78P-201ENST00000410940 126 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AC097463.2-201ENST00000421074 142 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 MTCO1P53-201ENST00000441633 699 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AL049714.1-201ENST00000466686 347 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AL357075.2-201ENST00000614906 189 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 MIR8074-201ENST00000615081 81 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 RNU4-73P-201ENST00000363164 141 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 MIR153-2-201ENST00000385225 87 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 NDUFS5P1-201ENST00000405668 289 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AL160275.3-201ENST00000423876 471 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 RPL37P21-201ENST00000435890 276 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 ZNF92P3-201ENST00000596594 954 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AC007349.4-201ENST00000608114 532 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 RPL22P13-201ENST00000493291 347 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 SNORA70.16-201ENST00000516390 95 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AC022202.1-201ENST00000613515 211 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AL512506.2-201ENST00000624472 458 ntBASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.21□□□□□ -2.38
ALMS1Q8TCU4 MIR325-201ENST00000385260 98 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 HMGB1P17-201ENST00000403495 628 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AL355615.1-201ENST00000406187 641 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 RNU6-45P-201ENST00000384471 107 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AL135790.2-201ENST00000437701 267 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 snoU13.11-201ENST00000459219 104 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 HMGB1P36-201ENST00000487709 576 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC107953.1-201ENST00000522216 297 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC018659.1-201ENST00000551083 169 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 RNU1-96P-201ENST00000364163 162 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 NCOR1P3-201ENST00000420479 303 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC092634.2-201ENST00000428146 1010 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 SNORD124-201ENST00000459577 104 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC240442.1-201ENST00000616055 283 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 MIR8065-201ENST00000620577 100 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 RNU1-58P-201ENST00000362413 163 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 RNU6-1243P-201ENST00000364028 107 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 RNU6-26P-201ENST00000383985 107 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 NDUFB4P7-201ENST00000423198 363 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC007742.1-201ENST00000425789 329 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 ELOCP26-201ENST00000436067 329 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 MTND5P8-201ENST00000449817 1083 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 AC145146.1-201ENST00000496370 254 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 CR383656.7-201ENST00000548164 174 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 MTCO2P2-201ENST00000591258 225 ntBASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.2□□□□□ -2.38
ALMS1Q8TCU4 MIR608-201ENST00000384820 100 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 RNU6-712P-201ENST00000410558 100 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AL449283.1-202ENST00000418249 604 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 BEND7P1-201ENST00000422058 457 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC023512.1-201ENST00000444513 499 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 RPS29P8-201ENST00000445109 171 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC104689.1-201ENST00000473356 768 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 COX6CP6-201ENST00000490840 228 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 SCARNA3-201ENST00000517097 143 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 SNORA31.22-201ENST00000517204 135 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 MIR4667-201ENST00000578933 66 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AP003973.1-201ENST00000604639 691 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 RPL7P29-201ENST00000437151 728 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 DDX3P2-201ENST00000446138 111 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 C1DP5-201ENST00000525775 383 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC073544.2-201ENST00000601155 540 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC009509.4-201ENST00000619202 509 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 RNU6-884P-201ENST00000363889 107 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 U8.7-201ENST00000364940 136 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 RNA5SP118-201ENST00000410385 109 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC092685.1-201ENST00000447960 1243 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AL441985.1-201ENST00000457727 251 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 SNORA4.4-201ENST00000515921 135 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 SNORA31.6-201ENST00000516241 130 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 AC007151.1-201ENST00000572774 483 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 MTND2P41-201ENST00000637599 773 ntBASIC0.19□□□□□ -2.38
ALMS1Q8TCU4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms