Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 U8.1-201ENST00000362843 134 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 RNU6-942P-201ENST00000363002 107 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 SNORD114-19-201ENST00000363072 75 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 RNU6-640P-201ENST00000363693 105 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 RNU6-454P-201ENST00000364292 107 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 RNU6-1131P-201ENST00000364955 107 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 MIR549A-201ENST00000385268 96 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 MIR5688-201ENST00000580619 83 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 IPO5P1-202ENST00000600039 287 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AP000542.2-201ENST00000623199 6179 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 AC073136.1-201ENST00000449426 2884 ntBASIC4.83□□□□□ -1.64
SNIP1Q8TAD8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 SNORD56.1-201ENST00000362913 68 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RNU6-1205P-201ENST00000363625 106 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 SNORA20B-201ENST00000384220 132 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RNU6-106P-201ENST00000384405 107 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RNU6-178P-201ENST00000384631 104 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RNU6-19P-201ENST00000384718 107 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 CYP4F29P-201ENST00000420685 446 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RN7SL319P-201ENST00000480656 221 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RN7SKP21-201ENST00000516503 220 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AC022790.1-201ENST00000522872 204 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 CYCSP39-201ENST00000565821 309 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 RN7SL690P-201ENST00000582087 240 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AC105254.2-201ENST00000603636 436 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 uc_338.7-201ENST00000621834 124 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AC138915.1-201ENST00000565427 1685 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 AL359693.1-201ENST00000614959 2407 ntBASIC4.82□□□□□ -1.64
SNIP1Q8TAD8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 ABCC13-202ENST00000463099 3842 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 DEFB108F-201ENST00000344638 222 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 RNA5SP173-201ENST00000364857 136 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 RNA5SP479-201ENST00000364858 117 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 RNU6-597P-201ENST00000365620 102 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 SNORA70.6-201ENST00000383934 134 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 RNU6-49P-201ENST00000384256 107 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 SNORA70E-201ENST00000384492 135 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 RNU4-43P-201ENST00000410628 137 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 AC004386.2-201ENST00000441858 148 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 AL354714.3-201ENST00000447284 493 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 Y_RNA.649-201ENST00000459077 103 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 MIR4512-201ENST00000583257 77 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 AC120024.3-201ENST00000603167 156 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 MIR1245B-201ENST00000636115 69 ntBASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNIP1Q8TAD8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms