Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01006Q8NI28 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 NACAP2-201ENST00000318548 624 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RNU6-1303P-201ENST00000364841 107 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RNU6-715P-201ENST00000365204 103 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 XGY1-201ENST00000381172 446 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 CD24P4-201ENST00000382840 243 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL606923.1-201ENST00000406616 190 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RNU6-1025P-201ENST00000410629 104 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 SKA2P1-201ENST00000425592 390 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL669831.1-202ENST00000428504 417 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 MTND1P2-201ENST00000430604 821 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC112220.1-201ENST00000434628 355 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 GTF2IP13-201ENST00000438487 386 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RBMX2P4-201ENST00000441256 376 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RPS15AP27-201ENST00000449183 343 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 SNRPFP3-201ENST00000457792 225 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 snoU13.28-201ENST00000459235 104 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC003982.1-202ENST00000469928 248 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RPS29P25-201ENST00000481709 171 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC022493.1-201ENST00000492984 337 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC008413.1-201ENST00000511864 177 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RNU6-1038P-201ENST00000516516 104 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RNU6-1178P-201ENST00000516674 107 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 RNU6-143P-201ENST00000516942 93 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL118558.2-201ENST00000556294 238 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL157871.3-201ENST00000557231 293 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 MTCO3P24-201ENST00000572729 782 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 SNORA59B-202ENST00000578183 701 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 MIR4424-201ENST00000585257 86 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC010525.2-201ENST00000590920 195 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC073539.2-201ENST00000597113 165 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AL138889.2-201ENST00000603883 242 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AC007938.3-201ENST00000604965 623 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 DUSP12P1-201ENST00000612874 516 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 uc_338.34-201ENST00000617467 174 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 AP003400.5-201ENST00000624827 617 ntBASIC2.1□□□□□ -2.07
LINC01006Q8NI28 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01006Q8NI28 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 Y_RNA.33-201ENST00000362591 102 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 RNA5SP139-201ENST00000364340 117 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 RNU6-877P-201ENST00000383868 107 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 RNU6-1027P-201ENST00000383998 107 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 SNORA67.4-201ENST00000384688 142 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 SNORA16.2-201ENST00000390991 127 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 MIR887-201ENST00000401258 79 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 RNU6-193P-201ENST00000410977 107 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 RPL21P90-201ENST00000415692 466 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 TRIAP1P1-201ENST00000427062 225 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 SCARNA18-201ENST00000459004 134 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AC090525.1-201ENST00000479116 478 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 RPS15AP34-201ENST00000487776 387 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AC112206.3-201ENST00000514578 389 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 RNA5SP385-201ENST00000515947 110 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AC025755.1-201ENST00000521306 278 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AL391261.3-201ENST00000557194 520 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC01006Q8NI28 MIR548AC-201ENST00000585049 88 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AL020991.1-201ENST00000612314 373 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 AL161629.2-201ENST00000615347 275 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 MIR3662-201ENST00000637030 95 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 U2.21-201ENST00000637295 81 ntBASIC2.09□□□□□ -2.07
LINC01006Q8NI28 OR4G1P-203ENST00000641984 1631 ntBASIC2.09□□□□□ -2.08
LINC01006Q8NI28 MTND4P35-201ENST00000604257 1375 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms