Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 RNU5A-1-201ENST00000362698 116 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.222-201ENST00000364264 102 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 RNA5SP42-201ENST00000364278 115 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 RNU6-1026P-201ENST00000384465 108 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 SNORA44-201ENST00000384584 132 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 Y_RNA.552-201ENST00000384665 112 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 RNA5SP296-201ENST00000410523 111 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 AL513331.1-201ENST00000411908 397 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 RNU7-169P-201ENST00000459456 61 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 RNU2-53P-201ENST00000516257 147 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 RNU7-4P-201ENST00000516961 62 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 IGHV3-76-201ENST00000522465 295 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 TRAV32-201ENST00000553993 340 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 AC068446.3-201ENST00000555285 382 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 AC006600.1-201ENST00000572529 153 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 MIR3976-201ENST00000606807 139 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 AL035425.3-201ENST00000564206 4996 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 MTND5P27-201ENST00000428871 1720 ntBASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.34□□□□□ -1.71
LINC00116Q8NCU8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LINC00116Q8NCU8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LINC00116Q8NCU8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
LINC00116Q8NCU8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
LINC00116Q8NCU8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LINC00116Q8NCU8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 MIR422A-201ENST00000362286 90 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 RNU6-472P-201ENST00000384299 107 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 SNORA68.2-201ENST00000391263 128 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 MIR1302-6-201ENST00000408466 90 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AC079780.1-201ENST00000428259 207 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AC073910.1-201ENST00000445047 438 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 HSPE1P6-201ENST00000479457 291 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AL049874.1-201ENST00000489560 388 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AC022493.1-201ENST00000492984 337 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 Y_RNA.687-201ENST00000516558 91 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 RNA5SP471-201ENST00000516971 106 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 MIR4672-201ENST00000583126 81 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AL162713.1-201ENST00000604480 262 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 AL121917.1-203ENST00000605534 577 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 ASNSP1-201ENST00000518311 1939 ntBASIC4.33□□□□□ -1.72
LINC00116Q8NCU8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 MIR625-201ENST00000385047 85 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 MIR301A-201ENST00000385261 86 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AL513475.1-201ENST00000406602 315 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 PGBD4P6-201ENST00000421501 610 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 RPS29P31-201ENST00000446147 164 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 RNU6-1132P-201ENST00000459214 107 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC087588.1-201ENST00000462203 316 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 HMGN2P13-201ENST00000476476 274 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC093852.1-201ENST00000503587 266 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 RNU1-86P-201ENST00000516108 154 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 MIR892C-201ENST00000516410 77 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 RNU1-107P-201ENST00000516617 154 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 RNU6-1315P-201ENST00000517187 99 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC023157.2-201ENST00000540596 141 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 MIR1273C-201ENST00000578669 77 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC002545.1-201ENST00000592511 181 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 KLKP1-201ENST00000595979 403 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC123912.5-201ENST00000605470 343 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC103858.2-201ENST00000621471 543 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC233263.6-201ENST00000631132 1963 ntBASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LINC00116Q8NCU8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.31□□□□□ -1.72
LINC00116Q8NCU8 SCN1A-220ENST00000641603 12506 ntBASIC4.31□□□□□ -1.72
LINC00116Q8NCU8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LINC00116Q8NCU8 AC118273.1-201ENST00000525324 3006 ntBASIC4.31□□□□□ -1.72
LINC00116Q8NCU8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LINC00116Q8NCU8 Y_RNA.214-201ENST00000364201 112 ntBASIC4.31□□□□□ -1.72
LINC00116Q8NCU8 RNU4-47P-201ENST00000410876 114 ntBASIC4.31□□□□□ -1.72
LINC00116Q8NCU8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms