Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 RNU4-15P-201ENST00000362613 141 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 U3.3-201ENST00000362986 216 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 RNA5SP443-201ENST00000363083 132 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 RNU1-136P-201ENST00000384181 164 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 Y_RNA.528-201ENST00000384575 108 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 Y_RNA.544-201ENST00000384650 113 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 MIR1263-201ENST00000408324 86 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 RN7SKP100-201ENST00000411258 284 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 REREP1Y-201ENST00000422655 198 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 AL021397.1-201ENST00000451806 248 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 RN7SL515P-201ENST00000463999 297 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 AC083982.1-201ENST00000485679 344 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 AC025647.1-201ENST00000517879 253 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 MIR4700-201ENST00000578311 74 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 AC112484.5-201ENST00000624189 228 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 OR13C1P-202ENST00000641378 2919 ntBASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EFCAB3Q8N7B9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 Y_RNA.52-201ENST00000362760 96 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 RNA5SP132-201ENST00000364725 118 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 SNORA70-201ENST00000384436 135 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 SNORA26-201ENST00000391286 122 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 RPL11P3-201ENST00000395256 523 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 RN7SKP216-201ENST00000411050 312 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 snoU13.14-201ENST00000459372 104 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 SNORA18.4-201ENST00000516440 124 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 MIR4505-201ENST00000582238 73 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 MIR3199-2-201ENST00000636243 86 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 AC004944.1-201ENST00000517807 3059 ntBASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
EFCAB3Q8N7B9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 RNA5SP326-201ENST00000363209 110 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 SNORA58B-201ENST00000364259 136 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 DYNLT3P1-201ENST00000378574 347 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 RNA5SP187-201ENST00000384400 119 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 MIR891A-201ENST00000401237 79 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 MIR1185-2-201ENST00000408687 86 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 EIF4A1P3-201ENST00000411521 244 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AC107626.1-201ENST00000471084 183 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AC093732.2-201ENST00000607950 274 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AC015726.2-201ENST00000620112 122 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 GVINP1-202ENST00000531871 7271 ntBASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.53□□□□□ -1.52
EFCAB3Q8N7B9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 AC079741.1-201ENST00000321498 212 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 RNU6-600P-201ENST00000362524 99 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 RNU6-271P-201ENST00000363858 105 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 SNORA7.2-201ENST00000364446 145 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 Y_RNA.634-201ENST00000364811 113 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 RN7SKP186-201ENST00000365371 303 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 MIR570-201ENST00000384917 97 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 MIR586-201ENST00000385035 97 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 MIR624-201ENST00000385217 97 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 SPTLC1P2-201ENST00000407089 121 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 GPS2P1-201ENST00000411761 986 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 AL121890.1-201ENST00000435457 205 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 OR2AO1P-201ENST00000476497 403 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 RNA5SP281-201ENST00000516504 135 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 IGKV1-22-201ENST00000524313 326 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 AC137627.1-201ENST00000545761 289 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 RNU6-91P-201ENST00000607774 107 ntBASIC5.52□□□□□ -1.53
EFCAB3Q8N7B9 AL139124.1-201ENST00000609123 421 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms