Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SNORA40.19-201ENST00000390846 128 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 RNU6-482P-201ENST00000391068 107 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SCXQ7RTU7 RPS20P2-201ENST00000402520 389 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AL356432.1-201ENST00000405809 419 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 FTH1P15-201ENST00000406984 280 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC106883.1-201ENST00000418805 562 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC006366.1-201ENST00000422002 759 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 RPL31P63-201ENST00000422565 375 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AL139824.2-201ENST00000458731 1095 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 RNU5A-4P-201ENST00000516588 111 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 OR5B19P-201ENST00000531766 928 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 NDUFA5P6-201ENST00000542110 379 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC123904.2-201ENST00000548059 300 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AP001004.1-201ENST00000582468 324 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC009977.1-201ENST00000586015 570 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AP000860.1-201ENST00000605250 559 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AL391834.2-201ENST00000609982 546 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.32□□□□□ -2.2
SCXQ7RTU7 AL356266.1-201ENST00000623311 483 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC017037.3-201ENST00000625016 472 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC010608.3-201ENST00000625048 527 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC103710.2-202ENST00000641454 2853 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 AC092104.1-201ENST00000497346 1441 ntBASIC1.32□□□□□ -2.2
SCXQ7RTU7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 RNU6-1010P-201ENST00000362757 107 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 RNU6-946P-201ENST00000383878 107 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 OR9R1P-201ENST00000412200 877 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC005005.2-201ENST00000420779 380 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AL022400.1-201ENST00000423946 935 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AL445646.1-201ENST00000431784 216 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC104058.1-201ENST00000448028 297 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AL009048.1-201ENST00000450437 298 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 KATNBL1P6-201ENST00000453433 915 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 MTND1P12-201ENST00000455231 147 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC093899.1-201ENST00000457984 376 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC004263.1-201ENST00000479327 332 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 RN7SL274P-201ENST00000492268 272 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 HSPE1P23-201ENST00000509838 286 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 RNU6-295P-201ENST00000516901 104 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC107934.1-201ENST00000522215 217 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC011979.2-201ENST00000527568 352 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 MIR3935-201ENST00000583472 104 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 AL022154.1-201ENST00000604698 785 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC130324.3-201ENST00000614165 542 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC022306.3-201ENST00000619930 550 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 AC092656.1-203ENST00000624134 423 ntBASIC1.31□□□□□ -2.2
SCXQ7RTU7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.31□□□□□ -2.2
SCXQ7RTU7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SCXQ7RTU7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.3□□□□□ -2.2
SCXQ7RTU7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SCXQ7RTU7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SCXQ7RTU7 AL391994.1-201ENST00000254724 282 ntBASIC1.3□□□□□ -2.2
SCXQ7RTU7 SNORD114-19-201ENST00000363072 75 ntBASIC1.3□□□□□ -2.2
SCXQ7RTU7 Y_RNA.97-201ENST00000363094 102 ntBASIC1.3□□□□□ -2.2
SCXQ7RTU7 RNU6-487P-201ENST00000365430 104 ntBASIC1.3□□□□□ -2.2
SCXQ7RTU7 RNU6-843P-201ENST00000384454 104 ntBASIC1.3□□□□□ -2.2
SCXQ7RTU7 RNU1-57P-201ENST00000384491 166 ntBASIC1.3□□□□□ -2.2
SCXQ7RTU7 RNU6-1140P-201ENST00000410517 106 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms