Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AP000873.1-201ENST00000463987 400 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC098869.1-201ENST00000481627 292 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC008526.1-201ENST00000509149 338 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 SCARNA16.2-201ENST00000516520 172 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 MIR5188-201ENST00000583467 113 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC012669.1-201ENST00000603209 283 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AL121992.2-201ENST00000606262 256 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC005520.5-201ENST00000613926 164 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AC018692.3-201ENST00000623929 123 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 PABPC1P7-201ENST00000413177 1513 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 SNORA38.1-201ENST00000364172 131 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RNY4P16-201ENST00000364768 94 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.353-201ENST00000365440 108 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-190P-201ENST00000384154 102 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-804P-201ENST00000384286 107 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AL606923.1-201ENST00000406616 190 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AL603910.2-201ENST00000407268 136 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 SNORA11.1-201ENST00000408133 129 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RPL23AP15-201ENST00000450202 459 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AC005297.2-201ENST00000450430 606 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 NF1P3-201ENST00000457709 450 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RPS29P15-201ENST00000458329 171 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RNU7-136P-201ENST00000458819 69 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RPL23AP11-201ENST00000475260 469 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RPL21P93-201ENST00000480465 489 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RNU4-71P-201ENST00000516258 113 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RNA5SP337-201ENST00000517007 109 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 RNU4-60P-201ENST00000517239 135 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AP003733.2-201ENST00000529409 171 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AC040926.1-201ENST00000530195 238 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 UBL5P2-201ENST00000583788 219 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 U7.8-201ENST00000619968 63 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 MIR4272-201ENST00000635924 64 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 AL450472.1-202ENST00000637286 180 ntBASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BHLHA9Q7RTU4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.237-201ENST00000364439 102 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-343P-201ENST00000364709 104 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-593P-201ENST00000364716 112 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RNA5SP167-201ENST00000365461 116 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.471-201ENST00000384312 102 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-39P-201ENST00000384344 107 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 MIR548H3-201ENST00000408771 118 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RNU2-28P-201ENST00000410457 189 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 AC236972.1-201ENST00000433225 199 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 CKS1BP5-201ENST00000434172 273 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 AC127537.2-201ENST00000439258 465 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RPL23AP33-201ENST00000442301 452 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 AC079781.2-201ENST00000446424 169 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 BX248409.1-201ENST00000455497 255 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RPS20P32-201ENST00000456044 356 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RPL21P104-201ENST00000464143 478 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 RPL21P71-201ENST00000465598 459 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.654-201ENST00000497848 106 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 AC116337.1-201ENST00000509680 687 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 AC008716.1-201ENST00000511084 513 ntBASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.3□□□□□ -1.88
BHLHA9Q7RTU4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms