Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL353706.1-201ENST00000436728 494 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC005832.3-201ENST00000537929 631 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC026371.1-201ENST00000551867 419 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 MIR4305-201ENST00000583252 102 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AL355877.2-201ENST00000603670 358 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC104417.1-201ENST00000523974 751 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC069294.1-201ENST00000608397 350 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 uc_338.6-201ENST00000613544 171 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AP003399.1-201ENST00000637534 361 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 FAM157B-203ENST00000639350 358 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 U3.20-201ENST00000390909 217 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 PNRC2P1-201ENST00000423940 420 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC090578.1-201ENST00000604955 591 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 AC079791.1-201ENST00000605356 973 ntBASIC-0.02□□□□□ -2.41
VPS13DQ5THJ4 SNORD49B-201ENST00000365172 72 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 RNU6-317P-201ENST00000384031 107 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 MIR938-201ENST00000401216 83 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 DUXAP1-201ENST00000556632 463 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 MIR4290-201ENST00000583807 95 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 MIR4765-201ENST00000585007 77 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC010900.2-201ENST00000604508 210 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 RNU5E-1-201ENST00000362477 120 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 RNU6-251P-201ENST00000363235 104 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 SNORA16.2-201ENST00000390991 127 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 CETN4P-201ENST00000432407 469 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 RAB11AP2-201ENST00000545905 639 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC136619.2-201ENST00000563361 631 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 MIR548AX-201ENST00000580117 73 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AL138963.2-201ENST00000605137 226 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 MIR6864-201ENST00000617935 70 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AL158163.2-201ENST00000619110 700 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 RNU6-923P-201ENST00000364753 107 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 snoU13.25-201ENST00000458945 104 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 snoU13.28-201ENST00000459235 104 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC098614.4-201ENST00000607601 462 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 AC073308.1-201ENST00000623696 305 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 Z75746.1-201ENST00000440243 2080 ntBASIC-0.03□□□□□ -2.41
VPS13DQ5THJ4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.03□□□□□ -2.42
VPS13DQ5THJ4 BTF3P11-201ENST00000426582 477 ntBASIC-0.03□□□□□ -2.42
VPS13DQ5THJ4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.03□□□□□ -2.42
VPS13DQ5THJ4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.03□□□□□ -2.42
VPS13DQ5THJ4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.03□□□□□ -2.42
VPS13DQ5THJ4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.03□□□□□ -2.42
VPS13DQ5THJ4 AL136520.1-202ENST00000555494 763 ntBASIC-0.03□□□□□ -2.42
VPS13DQ5THJ4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 RNU6-271P-201ENST00000363858 105 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 CCNG1P1-201ENST00000406783 885 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 RNU7-27P-201ENST00000459281 62 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC084024.2-201ENST00000503480 791 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 SNORA3.4-201ENST00000515969 96 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 NRON-201ENST00000517270 370 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AP001330.4-201ENST00000604350 154 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AC034236.3-201ENST00000605999 461 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AL022345.2-201ENST00000606307 135 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 RNU6-950P-201ENST00000384651 107 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 U6atac.2-201ENST00000408644 118 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 MTND4LP11-201ENST00000422184 280 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AL034418.1-201ENST00000448675 860 ntBASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13DQ5THJ4 AL360181.4-201ENST00000621752 134 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms