| HES3 | Q5TGS1 | AL160275.3-201 | ENST00000423876 | 471 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | XKRYP2-201 | ENST00000432915 | 492 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC011891.1-201 | ENST00000437088 | 432 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL139237.2-201 | ENST00000438454 | 493 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL353689.1-201 | ENST00000438895 | 199 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC244505.5-201 | ENST00000443639 | 207 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AMD1P1-201 | ENST00000457220 | 922 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | TH2LCRR-203 | ENST00000457489 | 439 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | RNU6-953P-201 | ENST00000459154 | 107 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MAGI1-AS1-201 | ENST00000472514 | 591 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC055855.1-201 | ENST00000489563 | 579 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | RPL39P36-201 | ENST00000490784 | 156 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC139453.3-201 | ENST00000493276 | 369 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | C4orf33-204 | ENST00000502887 | 1126 nt | TSL 1 (best) BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC116655.1-201 | ENST00000508324 | 901 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC091965.2-201 | ENST00000512324 | 613 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | RNU5B-3P-201 | ENST00000516601 | 115 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC090796.1-201 | ENST00000520370 | 567 nt | TSL 4 BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AP003498.1-201 | ENST00000532530 | 347 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MIR4452-201 | ENST00000583004 | 71 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | BNIP3P9-201 | ENST00000603714 | 553 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC112220.3-201 | ENST00000605502 | 502 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC087045.1-201 | ENST00000605856 | 382 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC092953.2-201 | ENST00000608000 | 699 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC017037.3-201 | ENST00000625016 | 472 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC099654.9-201 | ENST00000637055 | 678 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC106858.1-201 | ENST00000637497 | 429 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | PLCZ1-209 | ENST00000539875 | 1398 nt | TSL 1 (best) BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | LINC01938-201 | ENST00000521341 | 1864 nt | TSL 2 BASIC | 1.46 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MIR301A-201 | ENST00000385261 | 86 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MDM2-208 | ENST00000393410 | 732 nt | TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MDM2-210 | ENST00000393413 | 657 nt | TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | OR51A5P-201 | ENST00000415429 | 942 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC012370.1-201 | ENST00000419244 | 530 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | TXNL1P1-201 | ENST00000429528 | 554 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | LINC02195-201 | ENST00000443373 | 294 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL035415.1-201 | ENST00000447150 | 289 nt | TSL 5 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC003071.1-201 | ENST00000451219 | 789 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | snoU109.1-201 | ENST00000459339 | 135 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AHI1-208 | ENST00000488690 | 712 nt | TSL 5 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC018868.1-201 | ENST00000491307 | 315 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC084117.1-201 | ENST00000496975 | 270 nt | TSL 5 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | HTN1-204 | ENST00000511674 | 623 nt | APPRIS P1 TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC010587.2-201 | ENST00000511727 | 448 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | XIRP2-AS1-201 | ENST00000525330 | 776 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AP000753.2-201 | ENST00000540307 | 423 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL450442.1-201 | ENST00000554042 | 854 nt | TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | LINC00933-203 | ENST00000559812 | 219 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MMP2-AS1-201 | ENST00000565307 | 593 nt | TSL 4 BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC026271.5-201 | ENST00000577873 | 130 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MIR4299-201 | ENST00000577899 | 72 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | BNIP3P27-201 | ENST00000599991 | 412 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC034229.4-201 | ENST00000607861 | 441 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC009974.1-201 | ENST00000608881 | 455 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC072039.2-201 | ENST00000608883 | 439 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC096772.1-201 | ENST00000609146 | 564 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC005296.1-201 | ENST00000616145 | 209 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL353770.2-201 | ENST00000620024 | 78 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC091895.1-201 | ENST00000624494 | 256 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC099654.8-201 | ENST00000637757 | 681 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | ASPN-202 | ENST00000375544 | 2470 nt | APPRIS P1 TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | ZNF702P-202 | ENST00000434269 | 1966 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC092125.1-201 | ENST00000562568 | 1995 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | CYSLTR1-201 | ENST00000373304 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | ZBED5-202 | ENST00000432999 | 2741 nt | APPRIS P1 TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | MBNL3-212 | ENST00000538204 | 11294 nt | TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | RNU5E-1-201 | ENST00000362477 | 120 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | U8.14-201 | ENST00000390843 | 143 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC114763.2-201 | ENST00000412593 | 826 nt | TSL 2 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | RPS3AP37-201 | ENST00000419176 | 745 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL136985.1-201 | ENST00000424592 | 395 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | HMGN2P19-201 | ENST00000425149 | 265 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL354695.1-201 | ENST00000427935 | 228 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC093019.2-201 | ENST00000432294 | 384 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AP000949.1-201 | ENST00000438328 | 629 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | NEFMP1-201 | ENST00000443423 | 1006 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | CHODL-AS1-201 | ENST00000447175 | 1117 nt | TSL 2 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL138900.1-201 | ENST00000449345 | 399 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL353148.1-201 | ENST00000449761 | 463 nt | TSL 2 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | LINC00374-201 | ENST00000454780 | 800 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | BTF3P15-201 | ENST00000455606 | 336 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL359915.2-203 | ENST00000457043 | 540 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | RPL7P43-201 | ENST00000478876 | 753 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC079943.2-201 | ENST00000488999 | 716 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC026719.1-201 | ENST00000506059 | 456 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | ATP5EP1-201 | ENST00000510257 | 156 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | SNORA19.3-201 | ENST00000516165 | 130 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC107953.1-201 | ENST00000522216 | 297 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AP006587.4-201 | ENST00000526053 | 529 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AP000907.2-201 | ENST00000530827 | 353 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC024614.2-201 | ENST00000577584 | 372 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | LINC01919-202 | ENST00000579506 | 384 nt | TSL 3 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | SOX2-OT-224 | ENST00000595313 | 716 nt | TSL 5 BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL031274.2-201 | ENST00000599419 | 203 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL078603.1-201 | ENST00000603824 | 313 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AL358072.1-201 | ENST00000604156 | 575 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | AC006386.1-201 | ENST00000619436 | 415 nt | BASIC | 1.44 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | DLEU2_6.3-201 | ENST00000340052 | 136 nt | BASIC | 1.43 | □□□□□ -2.18 | | |
| HES3 | Q5TGS1 | RNY4P24-201 | ENST00000362735 | 96 nt | BASIC | 1.43 | □□□□□ -2.18 | | |