Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RPL21P103-201ENST00000479921 488 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC005832.3-201ENST00000537929 631 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC068714.1-201ENST00000559623 800 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC021749.1-201ENST00000604322 607 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 BTF3L4P2-201ENST00000392798 346 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 RNU6-1077P-201ENST00000410506 102 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 RNU6-272P-201ENST00000411028 104 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC096531.1-201ENST00000419107 107 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC099513.1-201ENST00000490423 301 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 AC022493.2-201ENST00000506122 481 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 UBL5P1-201ENST00000507979 193 ntBASIC0.07□□□□□ -2.4
UBR4Q5T4S7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.07□□□□□ -2.4
UBR4Q5T4S7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 RNU6-1207P-201ENST00000384343 107 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 TPTE2P6-202ENST00000445572 1007 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 ERHP1-201ENST00000523006 310 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 MIR4658-201ENST00000584344 65 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 CD24P4-201ENST00000382840 243 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 NUTF2P8-201ENST00000604593 363 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 Y_RNA.225-201ENST00000364326 97 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 TOMM22P2-201ENST00000430735 237 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 OR2A41P-201ENST00000473586 105 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC010301.1-201ENST00000473936 355 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC112518.2-201ENST00000508565 425 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 ZNF92P3-201ENST00000596594 954 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 RNU6-50P-201ENST00000362356 103 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 Y_RNA.543-201ENST00000384649 107 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC006512.1-201ENST00000468816 291 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC010409.1-201ENST00000487382 476 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC090616.5-202ENST00000582111 297 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AL592221.1-201ENST00000605266 382 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 AC009950.2-201ENST00000636548 183 ntBASIC0.06□□□□□ -2.4
UBR4Q5T4S7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 RNU6-968P-201ENST00000384076 107 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 RNA5SP496-201ENST00000391240 109 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 PIGFP2-201ENST00000421400 651 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC114982.1-201ENST00000469402 321 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC019288.1-201ENST00000557918 224 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AL355877.2-201ENST00000603670 358 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC069114.2-201ENST00000604699 304 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC025594.3-201ENST00000613068 790 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 RNA5SP109-201ENST00000391010 116 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 RN7SKP158-201ENST00000410453 326 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 SSR1P2-201ENST00000415208 787 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC023442.1-201ENST00000531247 422 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 MIR126-201ENST00000362291 85 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 RNU6-1079P-201ENST00000362861 110 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 SNORA25-201ENST00000384384 134 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 RN7SKP12-201ENST00000516275 143 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 HMGB1P46-201ENST00000520062 610 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 OR10V3P-201ENST00000525712 725 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 VN1R82P-201ENST00000601481 356 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC021171.1-201ENST00000603137 706 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC087821.2-201ENST00000637086 450 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 SNORA12.1-201ENST00000390873 148 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 OR5H4P-201ENST00000510851 923 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.05□□□□□ -2.4
UBR4Q5T4S7 MIR3937-201ENST00000580135 106 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC090616.3-201ENST00000582184 217 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 AC008739.2-201ENST00000597006 317 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 HSPE1P19-201ENST00000603327 295 ntBASIC0.05□□□□□ -2.4
UBR4Q5T4S7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
UBR4Q5T4S7 Y_RNA.121-201ENST00000363309 113 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 SEPT2P1-201ENST00000419651 180 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 SFR1P2-201ENST00000421841 730 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AC135999.1-201ENST00000478962 479 ntBASIC0.04□□□□□ -2.4
UBR4Q5T4S7 AC111000.5-201ENST00000506559 1178 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms