Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNU6-968P-201ENST00000384076 107 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 MIR32-201ENST00000384965 70 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 MIR34B-201ENST00000385076 84 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 SNORA40.5-201ENST00000391061 128 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 RNA5SP230-201ENST00000517039 122 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 RNA5SP165-201ENST00000517142 115 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 HMGB1P14-201ENST00000557424 591 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 MIR4660-201ENST00000583549 74 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 AC008121.1-201ENST00000603244 268 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 AL391261.4-201ENST00000616012 481 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 CUL1P1-201ENST00000509510 2425 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 AP001642.1-201ENST00000624727 2117 ntBASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO4Q2I0M5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 AC005332.5-201ENST00000591222 2919 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 MIR450A1-201ENST00000362262 91 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 Y_RNA.33-201ENST00000362591 102 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 SNORA25.7-201ENST00000364375 127 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 RNA5SP22-201ENST00000365393 109 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 APOOP4-201ENST00000513530 597 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 IFITM8P-201ENST00000522529 394 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 AC069294.1-201ENST00000608397 350 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 AC005296.1-201ENST00000616145 209 ntBASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO4Q2I0M5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RNU6-1180P-201ENST00000364935 107 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RNU6-294P-201ENST00000364999 102 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RNU5E-7P-201ENST00000365290 117 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RNU6-245P-201ENST00000384020 107 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 MIR153-2-201ENST00000385225 87 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 MIR301A-201ENST00000385261 86 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 BTF3L4P2-201ENST00000392798 346 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RNU6-1001P-201ENST00000411265 100 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RAB9AP3-201ENST00000412737 573 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AC092447.6-201ENST00000414578 210 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 BPY2DP-201ENST00000422208 265 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 PPP1R11P2-201ENST00000423543 382 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AC090774.1-201ENST00000435925 246 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RAB9AP1-201ENST00000449393 573 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 RN7SL517P-201ENST00000462240 305 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AC104164.2-201ENST00000496953 495 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AC005868.1-201ENST00000536421 331 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AL606490.9-201ENST00000603331 271 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AL121772.2-201ENST00000614331 297 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 MIR4275-201ENST00000636486 87 ntBASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO4Q2I0M5 AF127577.6-201ENST00000623352 2191 ntBASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 AL672167.1-203ENST00000641299 2975 ntBASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 AC104260.2-201ENST00000623551 3497 ntBASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RSPO4Q2I0M5 SAGE4P-201ENST00000442271 3381 ntBASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 MAPK10-320ENST00000641462 6696 ntBASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 SRP72P2-201ENST00000344851 1979 ntBASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 AC069528.2-201ENST00000624849 1991 ntBASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RSPO4Q2I0M5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms