Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC007619.2-201ENST00000605743 379 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 RMST_8.1-201ENST00000610287 165 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SF3B3Q15393 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SF3B3Q15393 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SF3B3Q15393 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SF3B3Q15393 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SF3B3Q15393 Y_RNA.399-201ENST00000383955 105 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 RNA5SP219-201ENST00000390940 113 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 SNORA16.2-201ENST00000390991 127 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 SNORD70.1-201ENST00000391007 85 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 RNU6-882P-201ENST00000391025 103 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 SNORA75.4-201ENST00000391278 119 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 RPL37P10-201ENST00000412884 288 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 RPL7P10-201ENST00000417407 739 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 FABP5P14-201ENST00000437273 393 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AC104058.1-201ENST00000448028 297 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 MTND1P17-201ENST00000448961 204 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.74□□□□□ -1.81
SF3B3Q15393 Y_RNA.631-201ENST00000459607 101 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 RPS4XP22-201ENST00000480755 780 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AC083906.5-201ENST00000503722 328 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.74□□□□□ -1.81
SF3B3Q15393 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.74□□□□□ -1.81
SF3B3Q15393 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.74□□□□□ -1.81
SF3B3Q15393 RN7SKP24-201ENST00000515888 284 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AC093331.1-201ENST00000521474 169 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.74□□□□□ -1.81
SF3B3Q15393 MIR4790-201ENST00000577799 79 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SF3B3Q15393 ELOCP29-201ENST00000588193 334 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AL670379.4-201ENST00000605279 254 ntBASIC3.74□□□□□ -1.81
SF3B3Q15393 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.74□□□□□ -1.81
SF3B3Q15393 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SF3B3Q15393 Y_RNA.135-201ENST00000363439 95 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 Y_RNA.216-201ENST00000364205 93 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 Y_RNA.395-201ENST00000383945 109 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 MIR606-201ENST00000384851 96 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 MTCYBP4-201ENST00000401524 249 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AL591034.1-201ENST00000407447 340 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 RNU6-370P-201ENST00000411008 104 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 SKA2P1-201ENST00000425592 390 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 Z82205.1-201ENST00000428456 297 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AL669831.1-202ENST00000428504 417 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AL121871.1-201ENST00000443413 436 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 NEFMP1-201ENST00000443423 1006 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.73□□□□□ -1.81
SF3B3Q15393 TRBV1-201ENST00000476502 284 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 RPL39P5-202ENST00000512505 151 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 SNORA31.3-201ENST00000516029 96 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 RNA5SP367-201ENST00000516557 118 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 Y_RNA.689-201ENST00000516589 107 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 Y_RNA.711-201ENST00000516993 102 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 RN7SKP258-201ENST00000517151 304 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AC011602.1-201ENST00000546484 331 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 IMMP1LP2-201ENST00000552954 492 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 GTF3AP2-201ENST00000557014 266 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.73□□□□□ -1.81
SF3B3Q15393 MIR3162-201ENST00000581818 82 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 XIAPP1-201ENST00000603162 600 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AC104763.2-201ENST00000604179 382 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AC116312.1-201ENST00000606841 314 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AC022893.3-201ENST00000607665 437 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 U2.17-201ENST00000611454 95 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 SDR42E1P2-201ENST00000614861 481 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AL138726.1-201ENST00000614873 333 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 AL359547.2-201ENST00000615810 418 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 PWAR6-201ENST00000552334 4618 ntBASIC3.73□□□□□ -1.81
SF3B3Q15393 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.73□□□□□ -1.81
SF3B3Q15393 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SF3B3Q15393 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.72□□□□□ -1.81
SF3B3Q15393 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.72□□□□□ -1.81
SF3B3Q15393 SNORA63C-201ENST00000364578 129 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 SNORD116-11-201ENST00000383882 92 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 RNU6-76P-201ENST00000384060 104 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 RNU6-393P-201ENST00000384475 107 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 RNU6-851P-201ENST00000384565 107 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 AL360182.1-201ENST00000397433 468 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 AC092809.3-201ENST00000415453 231 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 AL139396.1-201ENST00000421137 167 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 AL139281.1-201ENST00000422120 335 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 BX679664.1-201ENST00000434429 253 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 HMGN2P13-201ENST00000476476 274 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 MTND4LP22-201ENST00000508209 276 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 AC010265.1-201ENST00000513509 211 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 RN7SKP132-201ENST00000516001 208 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 RNU2-69P-201ENST00000516061 100 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 RNU1-143P-201ENST00000516296 146 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.72□□□□□ -1.81
SF3B3Q15393 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SF3B3Q15393 AC007151.1-201ENST00000572774 483 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 ATP1B3P1-201ENST00000605365 821 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 AL158032.1-201ENST00000605401 106 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 U1.23-201ENST00000610293 146 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 FAM157A-202ENST00000615155 405 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 RNU1-68P-201ENST00000615382 146 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 U1.39-201ENST00000621562 146 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 AC096644.4-201ENST00000563417 2912 ntBASIC3.72□□□□□ -1.81
SF3B3Q15393 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms