Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 MTND1P35-201ENST00000526739 508 ntBASIC3.31□□□□□ -1.88
DDR1Q08345 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.31□□□□□ -1.88
DDR1Q08345 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.31□□□□□ -1.88
DDR1Q08345 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
DDR1Q08345 AL121992.2-201ENST00000606262 256 ntBASIC3.31□□□□□ -1.88
DDR1Q08345 AP001486.3-201ENST00000615334 372 ntBASIC3.31□□□□□ -1.88
DDR1Q08345 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.31□□□□□ -1.88
DDR1Q08345 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
DDR1Q08345 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
DDR1Q08345 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DDR1Q08345 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
DDR1Q08345 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDR1Q08345 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDR1Q08345 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDR1Q08345 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
DDR1Q08345 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 Y_RNA.263-201ENST00000364659 114 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 RNU6-1027P-201ENST00000383998 107 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DDR1Q08345 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DDR1Q08345 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDR1Q08345 AL359634.1-202ENST00000404721 284 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 GTF2IP20-201ENST00000431663 360 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 MTATP6P16-201ENST00000434543 526 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 HMGB3P12-201ENST00000438745 556 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 CALM1P1-201ENST00000442082 433 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 MTCO3P45-201ENST00000443036 613 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 DDX3P2-201ENST00000446138 111 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.3□□□□□ -1.88
DDR1Q08345 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 SNRPGP6-201ENST00000451124 220 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 CACYBPP2-201ENST00000453625 678 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 RPS15AP36-201ENST00000492022 382 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.3□□□□□ -1.88
DDR1Q08345 Y_RNA.701-201ENST00000516812 110 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.3□□□□□ -1.88
DDR1Q08345 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDR1Q08345 CASP1P1-201ENST00000526345 212 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.3□□□□□ -1.88
DDR1Q08345 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.3□□□□□ -1.88
DDR1Q08345 MTCO3P13-201ENST00000577757 781 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AC090132.2-201ENST00000615881 347 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.3□□□□□ -1.88
DDR1Q08345 MIR3662-201ENST00000637030 95 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AL049641.1-201ENST00000441055 1948 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 AC007785.2-201ENST00000598627 1916 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 OR4G2P-202ENST00000641004 1759 ntBASIC3.3□□□□□ -1.88
DDR1Q08345 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
DDR1Q08345 CKAP2P1-201ENST00000555477 2049 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDR1Q08345 AC006020.1-201ENST00000420179 1854 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AL139276.1-201ENST00000311910 1001 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 SNORD62.1-201ENST00000362541 86 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 RNU6-960P-201ENST00000364056 120 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 Y_RNA.381-201ENST00000365666 102 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 MIR454-201ENST00000390180 115 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 MIR1289-2-201ENST00000408360 111 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 RN7SKP223-201ENST00000410582 62 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 RN7SKP192-201ENST00000411291 327 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.29□□□□□ -1.88
DDR1Q08345 USP9YP20-201ENST00000419224 558 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 ZNF90P2-204ENST00000419323 1075 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.29□□□□□ -1.88
DDR1Q08345 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
DDR1Q08345 AL512844.2-201ENST00000433990 593 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.29□□□□□ -1.88
DDR1Q08345 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.29□□□□□ -1.88
DDR1Q08345 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDR1Q08345 PMCHL2-203ENST00000457791 237 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.29□□□□□ -1.88
DDR1Q08345 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.29□□□□□ -1.88
DDR1Q08345 MTCO3P9-201ENST00000506989 781 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 RN7SKP43-201ENST00000516173 320 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 Y_RNA.675-201ENST00000516389 149 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 IGKV3-31-201ENST00000523109 329 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.29□□□□□ -1.88
DDR1Q08345 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.29□□□□□ -1.88
DDR1Q08345 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.29□□□□□ -1.88
DDR1Q08345 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.29□□□□□ -1.88
DDR1Q08345 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.29□□□□□ -1.88
DDR1Q08345 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.29□□□□□ -1.88
DDR1Q08345 AC024619.4-201ENST00000580924 316 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.29□□□□□ -1.88
DDR1Q08345 MIR4795-201ENST00000584182 89 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AC005498.1-201ENST00000592125 465 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AC022432.1-201ENST00000595739 310 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 Z84480.1-201ENST00000605131 311 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AC090115.4-201ENST00000609970 188 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AC004852.3-201ENST00000614131 326 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 SDR42E1P2-201ENST00000614861 481 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AC024614.3-201ENST00000637860 256 ntBASIC3.29□□□□□ -1.88
DDR1Q08345 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.29□□□□□ -1.88
DDR1Q08345 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms