Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH1Q08174 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH1Q08174 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDH1Q08174 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDH1Q08174 MFSD8-242ENST00000641690 4199 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH1Q08174 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 SNORD32A-201ENST00000364805 84 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 RNU6-21P-201ENST00000384710 107 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 Y_RNA.569-201ENST00000384749 103 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AL512844.2-201ENST00000433990 593 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH1Q08174 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH1Q08174 AC073901.1-201ENST00000462471 408 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 RPL23AP14-201ENST00000468281 468 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 RN7SL738P-201ENST00000470264 297 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH1Q08174 RN7SKP49-201ENST00000516675 260 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 RNU6-861P-201ENST00000516745 106 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AP001781.1-201ENST00000530977 207 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH1Q08174 MIR4423-201ENST00000580922 80 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH1Q08174 AC020895.1-201ENST00000595362 272 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AC079587.1-201ENST00000603846 277 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH1Q08174 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 AL136964.1-201ENST00000622038 2990 ntBASIC4.29□□□□□ -1.72
PCDH1Q08174 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH1Q08174 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH1Q08174 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH1Q08174 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH1Q08174 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
PCDH1Q08174 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDH1Q08174 AL079305.1-201ENST00000623159 3008 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PCDH1Q08174 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH1Q08174 MIR448-201ENST00000362131 111 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 Y_RNA.292-201ENST00000364904 97 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 RNU6-1279P-201ENST00000383917 103 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RNU6-142P-201ENST00000384019 107 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RNU6-217P-201ENST00000384164 104 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 SNORD116-20-201ENST00000384529 92 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 MIR493-201ENST00000385254 89 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RNU6-1140P-201ENST00000410517 106 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RPL21P66-201ENST00000426566 466 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RPL23AP95-201ENST00000426806 265 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH1Q08174 MRPL42P6-201ENST00000486397 371 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RPL30P5-201ENST00000494923 336 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 SNORD116-28-201ENST00000516123 91 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 RNU7-110P-201ENST00000516891 62 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH1Q08174 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH1Q08174 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDH1Q08174 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 AC016256.1-201ENST00000547971 354 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDH1Q08174 AC027288.2-201ENST00000553028 243 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 AL356157.2-201ENST00000605122 111 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 AC005296.1-201ENST00000616145 209 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDH1Q08174 AC112200.1-201ENST00000625015 234 ntBASIC4.28□□□□□ -1.72
PCDH1Q08174 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDH1Q08174 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH1Q08174 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
PCDH1Q08174 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH1Q08174 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDH1Q08174 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH1Q08174 AC090740.1-201ENST00000623193 2262 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 RNU6-778P-201ENST00000363269 103 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 Y_RNA.122-201ENST00000363331 96 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 RNU6-1020P-201ENST00000363684 107 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 Y_RNA.319-201ENST00000365138 92 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 MIR10B-201ENST00000385011 110 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 RPL26P27-201ENST00000414397 437 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH1Q08174 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH1Q08174 AC009220.1-201ENST00000451614 275 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH1Q08174 RN7SL481P-201ENST00000477764 299 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 RPL26P26-201ENST00000480251 434 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 AC025445.1-201ENST00000502728 300 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 RNU6-1282P-201ENST00000516735 96 ntBASIC4.27□□□□□ -1.73
PCDH1Q08174 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms