Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNY4P16-201ENST00000364768 94 ntBASIC1.9□□□□□ -2.11
CDH6P55285 SNORA25B-201ENST00000365507 128 ntBASIC1.9□□□□□ -2.11
CDH6P55285 RNU6-395P-201ENST00000365662 106 ntBASIC1.9□□□□□ -2.11
CDH6P55285 RNU6-190P-201ENST00000384154 102 ntBASIC1.9□□□□□ -2.11
CDH6P55285 HMGN2P39-201ENST00000398005 273 ntBASIC1.9□□□□□ -2.11
CDH6P55285 FTH1P15-201ENST00000406984 280 ntBASIC1.9□□□□□ -2.11
CDH6P55285 RNU6-1140P-201ENST00000410517 106 ntBASIC1.9□□□□□ -2.11
CDH6P55285 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH6P55285 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH6P55285 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.9□□□□□ -2.11
CDH6P55285 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH6P55285 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH6P55285 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH6P55285 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH6P55285 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.9□□□□□ -2.11
CDH6P55285 AL513124.1-201ENST00000450410 614 ntBASIC1.9□□□□□ -2.11
CDH6P55285 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.9□□□□□ -2.11
CDH6P55285 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
CDH6P55285 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.9□□□□□ -2.11
CDH6P55285 SNORA4.4-201ENST00000515921 135 ntBASIC1.9□□□□□ -2.11
CDH6P55285 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
CDH6P55285 AC110588.1-201ENST00000559699 137 ntBASIC1.9□□□□□ -2.11
CDH6P55285 AP001004.1-201ENST00000582468 324 ntBASIC1.9□□□□□ -2.11
CDH6P55285 AL031274.2-201ENST00000599419 203 ntBASIC1.9□□□□□ -2.11
CDH6P55285 AC121334.2-201ENST00000605387 271 ntBASIC1.9□□□□□ -2.11
CDH6P55285 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.9□□□□□ -2.11
CDH6P55285 AC130324.3-201ENST00000614165 542 ntBASIC1.9□□□□□ -2.11
CDH6P55285 AC006338.1-201ENST00000618453 749 ntBASIC1.9□□□□□ -2.11
CDH6P55285 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CDH6P55285 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CDH6P55285 AC008555.8-201ENST00000623602 2168 ntBASIC1.89□□□□□ -2.11
CDH6P55285 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH6P55285 SNORD114-19-201ENST00000363072 75 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AL512604.1-201ENST00000404812 257 ntBASIC1.89□□□□□ -2.11
CDH6P55285 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH6P55285 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH6P55285 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.89□□□□□ -2.11
CDH6P55285 GDI2P2-201ENST00000445131 608 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH6P55285 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
CDH6P55285 AC107953.1-201ENST00000522216 297 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC011979.2-201ENST00000527568 352 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.89□□□□□ -2.11
CDH6P55285 AC007375.1-201ENST00000554513 578 ntBASIC1.89□□□□□ -2.11
CDH6P55285 ANP32BP3-201ENST00000559213 706 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC136619.2-201ENST00000563361 631 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH6P55285 BNIP3P39-201ENST00000601077 554 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC018638.7-201ENST00000605836 1114 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC009318.2-201ENST00000610917 651 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC005296.1-201ENST00000616145 209 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC092656.1-203ENST00000624134 423 ntBASIC1.89□□□□□ -2.11
CDH6P55285 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.89□□□□□ -2.11
CDH6P55285 AL354685.2-201ENST00000448218 1447 ntBASIC1.89□□□□□ -2.11
CDH6P55285 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH6P55285 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDH6P55285 RNU6-946P-201ENST00000383878 107 ntBASIC1.88□□□□□ -2.11
CDH6P55285 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CDH6P55285 AC009518.2-201ENST00000418056 731 ntBASIC1.88□□□□□ -2.11
CDH6P55285 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH6P55285 XKRYP1-201ENST00000423438 492 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH6P55285 XKRYP2-201ENST00000432915 492 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH6P55285 AL354941.1-201ENST00000438600 464 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH6P55285 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH6P55285 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH6P55285 AC034244.1-201ENST00000507687 207 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH6P55285 SCARNA1-201ENST00000517138 166 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC034114.1-201ENST00000520293 285 ntBASIC1.88□□□□□ -2.11
CDH6P55285 OR5B19P-201ENST00000531766 928 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC090888.2-201ENST00000559765 1144 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC233702.2-202ENST00000562547 291 ntBASIC1.88□□□□□ -2.11
CDH6P55285 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
CDH6P55285 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH6P55285 MIR15A-201ENST00000607334 83 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH6P55285 TUSC7.1-201ENST00000610969 165 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC016597.2-201ENST00000613256 341 ntBASIC1.88□□□□□ -2.11
CDH6P55285 AC022202.1-201ENST00000613515 211 ntBASIC1.88□□□□□ -2.11
CDH6P55285 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
CDH6P55285 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH6P55285 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH6P55285 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH6P55285 AL391994.1-201ENST00000254724 282 ntBASIC1.87□□□□□ -2.11
CDH6P55285 SNORA40.19-201ENST00000390846 128 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AC092809.3-201ENST00000415453 231 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH6P55285 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.87□□□□□ -2.11
CDH6P55285 RPL22P17-201ENST00000438729 315 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH6P55285 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.87□□□□□ -2.11
CDH6P55285 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH6P55285 KATNBL1P6-201ENST00000453433 915 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH6P55285 MED28P2-201ENST00000475771 317 ntBASIC1.87□□□□□ -2.11
CDH6P55285 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
CDH6P55285 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms