Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 Y_RNA.517-201ENST00000384551 106 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 AL356057.2-201ENST00000403318 432 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 AL714022.1-201ENST00000439897 151 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.45□□□□□ -2.02
HMGCS2P54868 AC009296.1-201ENST00000443146 155 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 RPS15AP27-201ENST00000449183 343 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 AL118520.1-201ENST00000450770 291 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.45□□□□□ -2.02
HMGCS2P54868 AC008571.1-201ENST00000467232 300 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
HMGCS2P54868 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.45□□□□□ -2.02
HMGCS2P54868 RPPH1-2P-201ENST00000516688 293 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGCS2P54868 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGCS2P54868 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGCS2P54868 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGCS2P54868 AC010546.1-201ENST00000569391 485 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.45□□□□□ -2.02
HMGCS2P54868 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.45□□□□□ -2.02
HMGCS2P54868 AL355877.2-201ENST00000603670 358 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 AL391646.1-201ENST00000603860 190 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGCS2P54868 AC093648.1-201ENST00000623546 606 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 FRG1KP-201ENST00000623592 341 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 MTND5P42-201ENST00000637720 498 ntBASIC2.45□□□□□ -2.02
HMGCS2P54868 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.45□□□□□ -2.02
HMGCS2P54868 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HMGCS2P54868 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HMGCS2P54868 UBE2L2-201ENST00000254302 429 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC073343.1-201ENST00000328239 651 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 RNU6-1159P-201ENST00000362933 107 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 Y_RNA.367-201ENST00000365544 101 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 RNU5A-6P-201ENST00000384136 116 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 SNORA24.1-201ENST00000384401 135 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 MIR1-2-201ENST00000384961 85 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS2P54868 RNU2-39P-201ENST00000410604 198 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC092809.3-201ENST00000415453 231 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 BTF3L4P3-201ENST00000418879 476 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.44□□□□□ -2.02
HMGCS2P54868 AC099548.1-201ENST00000421443 426 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 ISCA1P1-201ENST00000426679 387 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC009414.1-201ENST00000427200 443 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 GPR143P-201ENST00000434155 205 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.44□□□□□ -2.02
HMGCS2P54868 RPS3AP17-201ENST00000472594 777 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 RPL31P41-201ENST00000477967 372 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 RPS15AP34-201ENST00000487776 387 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AL160314.1-201ENST00000490836 438 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 CKS1BP2-201ENST00000497342 240 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.44□□□□□ -2.02
HMGCS2P54868 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS2P54868 RN7SKP219-201ENST00000516825 296 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 SUB1P1-201ENST00000524415 382 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 ATP5F1P5-201ENST00000526403 760 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS2P54868 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS2P54868 AC098848.2-201ENST00000588023 330 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC068790.2-201ENST00000602601 557 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS2P54868 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.44□□□□□ -2.02
HMGCS2P54868 AC138649.3-201ENST00000622154 254 ntBASIC2.44□□□□□ -2.02
HMGCS2P54868 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HMGCS2P54868 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HMGCS2P54868 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.44□□□□□ -2.02
HMGCS2P54868 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGCS2P54868 RNU6-1097P-201ENST00000363586 107 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 RNU6-288P-201ENST00000363690 104 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 RNU6-512P-201ENST00000364438 103 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 RNU6-817P-201ENST00000391083 104 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HMGCS2P54868 RPS12P24-201ENST00000412619 387 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AC098614.2-201ENST00000426040 255 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.43□□□□□ -2.02
HMGCS2P54868 MTCO2P19-201ENST00000427513 598 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 ELOCP14-201ENST00000428070 331 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 AL451074.3-201ENST00000437709 472 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 ELOCP7-201ENST00000439968 331 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 RPL7P12-201ENST00000446719 750 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 FABP5P15-201ENST00000453566 214 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.43□□□□□ -2.02
HMGCS2P54868 RNA5SP458-201ENST00000516188 119 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 SNORD27.1-201ENST00000516319 72 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 FAM92A1P1-201ENST00000528023 890 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AC011494.1-201ENST00000596454 237 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 MIR6845-201ENST00000613182 61 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 Y_RNA.783-201ENST00000613546 102 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AC130324.3-201ENST00000614165 542 ntBASIC2.43□□□□□ -2.02
HMGCS2P54868 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.43□□□□□ -2.02
HMGCS2P54868 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms