Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN1P54253 RNU5A-1-201ENST00000362698 116 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNU6-1287P-201ENST00000362914 107 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 Y_RNA.222-201ENST00000364264 102 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 SNORD115-7-201ENST00000365306 82 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 SMIM11P1-201ENST00000369586 178 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AC117470.1-201ENST00000381974 330 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNU6-701P-201ENST00000384059 107 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNU6-1060P-201ENST00000384664 107 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 Y_RNA.576-201ENST00000384781 102 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 MIR514A2-201ENST00000385131 88 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 MIR514A3-201ENST00000385132 88 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 MTHFD2P2-201ENST00000407725 247 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN1P54253 DBIP2-201ENST00000419076 262 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AL590135.1-201ENST00000422215 156 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN1P54253 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN1P54253 AC098831.1-201ENST00000440661 216 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 TXNP1-201ENST00000441872 371 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 SNRPFP3-201ENST00000457792 225 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 Y_RNA.635-201ENST00000459041 101 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNU6-1132P-201ENST00000459214 107 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RPL21P10-201ENST00000463521 490 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AC015911.1-201ENST00000495111 156 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RPL7P47-201ENST00000497299 556 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.79□□□□□ -1.8
ATXN1P54253 RNU2-53P-201ENST00000516257 147 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNY3P15-201ENST00000516297 97 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 Y_RNA.673-201ENST00000516306 88 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 Y_RNA.682-201ENST00000516457 100 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNU6-1088P-201ENST00000516850 104 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNU6-840P-201ENST00000517275 65 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN1P54253 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN1P54253 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.79□□□□□ -1.8
ATXN1P54253 OR4H12P-201ENST00000556269 907 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.79□□□□□ -1.8
ATXN1P54253 LARP7P3-201ENST00000579888 337 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.79□□□□□ -1.8
ATXN1P54253 AC012493.2-201ENST00000595083 291 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AC004805.2-201ENST00000605382 482 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 RNU6-89P-201ENST00000606519 100 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AP001486.3-201ENST00000615334 372 ntBASIC3.79□□□□□ -1.8
ATXN1P54253 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.79□□□□□ -1.8
ATXN1P54253 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.79□□□□□ -1.8
ATXN1P54253 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.79□□□□□ -1.8
ATXN1P54253 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATXN1P54253 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN1P54253 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.78□□□□□ -1.8
ATXN1P54253 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN1P54253 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN1P54253 TPTE2P4-201ENST00000258589 1605 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN1P54253 AC118273.1-201ENST00000525324 3006 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-874P-201ENST00000362390 105 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 Y_RNA.80-201ENST00000362996 102 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-1188P-201ENST00000363795 107 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-200P-201ENST00000364743 107 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-946P-201ENST00000383878 107 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-886P-201ENST00000384319 105 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 Y_RNA.483-201ENST00000384380 101 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 Y_RNA.485-201ENST00000384395 102 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 UBE2V1P2-201ENST00000397758 440 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 NDUFS5P1-201ENST00000405668 289 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU4-26P-201ENST00000410270 107 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU2-14P-201ENST00000411053 191 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-387P-201ENST00000411331 105 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.78□□□□□ -1.8
ATXN1P54253 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
ATXN1P54253 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 TMEM167AP1-201ENST00000423409 219 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC093151.1-201ENST00000427711 313 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC005326.1-201ENST00000429197 123 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.78□□□□□ -1.8
ATXN1P54253 GSTA11P-201ENST00000452866 669 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 ELOCP24-201ENST00000456370 334 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.78□□□□□ -1.8
ATXN1P54253 AC007547.1-201ENST00000462177 490 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RPL23AP11-201ENST00000475260 469 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.78□□□□□ -1.8
ATXN1P54253 AC083904.1-201ENST00000487828 231 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC104806.1-201ENST00000508720 308 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-273P-201ENST00000516937 96 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNU6-111P-201ENST00000517179 105 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.78□□□□□ -1.8
ATXN1P54253 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.78□□□□□ -1.8
ATXN1P54253 MIR3942-201ENST00000585264 109 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 KLKP1-201ENST00000595979 403 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC078899.3-201ENST00000599065 212 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC010620.2-201ENST00000600135 313 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 AC009570.1-201ENST00000609599 745 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN1P54253 AC010615.1-201ENST00000594254 1764 ntBASIC3.78□□□□□ -1.8
ATXN1P54253 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
ATXN1P54253 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ATXN1P54253 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATXN1P54253 SRP72P2-201ENST00000344851 1979 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms