Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 WASF1P1-201ENST00000447560 1131 ntBASIC2.7□□□□□ -1.98
PDX1P52945 RPS3P1-201ENST00000456781 192 ntBASIC2.7□□□□□ -1.98
PDX1P52945 SNRPFP3-201ENST00000457792 225 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AC092798.1-201ENST00000458542 409 ntBASIC2.7□□□□□ -1.98
PDX1P52945 FAM92A1P2-202ENST00000504766 877 ntBASIC2.7□□□□□ -1.98
PDX1P52945 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.7□□□□□ -1.98
PDX1P52945 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.7□□□□□ -1.98
PDX1P52945 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PDX1P52945 MTND3P25-201ENST00000509243 135 ntBASIC2.7□□□□□ -1.98
PDX1P52945 RNU1-86P-201ENST00000516108 154 ntBASIC2.7□□□□□ -1.98
PDX1P52945 RNU1-107P-201ENST00000516617 154 ntBASIC2.7□□□□□ -1.98
PDX1P52945 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.7□□□□□ -1.98
PDX1P52945 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.7□□□□□ -1.98
PDX1P52945 MIR4424-201ENST00000585257 86 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AL162413.1-201ENST00000603198 110 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AL355598.1-201ENST00000604169 202 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AC107304.1-201ENST00000604229 296 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AL020991.1-201ENST00000612314 373 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AP003400.5-201ENST00000624827 617 ntBASIC2.7□□□□□ -1.98
PDX1P52945 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.7□□□□□ -1.98
PDX1P52945 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
PDX1P52945 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.7□□□□□ -1.98
PDX1P52945 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PDX1P52945 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDX1P52945 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDX1P52945 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDX1P52945 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDX1P52945 RNU6-859P-201ENST00000362728 107 ntBASIC2.69□□□□□ -1.98
PDX1P52945 RNU1-35P-201ENST00000362782 153 ntBASIC2.69□□□□□ -1.98
PDX1P52945 RNY4P14-201ENST00000363656 96 ntBASIC2.69□□□□□ -1.98
PDX1P52945 SNORD14B-201ENST00000364533 90 ntBASIC2.69□□□□□ -1.98
PDX1P52945 RNU6-384P-201ENST00000364900 104 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 Y_RNA.402-201ENST00000383972 102 ntBASIC2.69□□□□□ -1.98
PDX1P52945 MIR9-1-201ENST00000385198 89 ntBASIC2.69□□□□□ -1.98
PDX1P52945 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PDX1P52945 SNORD37.1-201ENST00000390968 65 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AL138827.1-201ENST00000402666 306 ntBASIC2.69□□□□□ -1.98
PDX1P52945 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 RPS3AP44-201ENST00000425466 790 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.69□□□□□ -1.98
PDX1P52945 SEPT14P3-201ENST00000439401 183 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.69□□□□□ -1.98
PDX1P52945 AL732372.2-207ENST00000445840 183 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 MTATP6P7-201ENST00000453315 681 ntBASIC2.69□□□□□ -1.98
PDX1P52945 SEPT14P2-201ENST00000453405 183 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 SCARNA18-201ENST00000459004 134 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC104472.2-201ENST00000469035 601 ntBASIC2.69□□□□□ -1.98
PDX1P52945 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.69□□□□□ -1.98
PDX1P52945 SEPT14P4-201ENST00000513445 186 ntBASIC2.69□□□□□ -1.98
PDX1P52945 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
PDX1P52945 MTND4LP26-201ENST00000518144 282 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 AC022634.1-201ENST00000520765 532 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.69□□□□□ -1.98
PDX1P52945 FO082796.1-201ENST00000523795 183 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AL137161.1-201ENST00000532231 390 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC091544.4-201ENST00000555268 342 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AL118558.2-201ENST00000556294 238 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AL138976.2-201ENST00000563989 694 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.69□□□□□ -1.98
PDX1P52945 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
PDX1P52945 AL645944.1-201ENST00000603857 493 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC069234.5-201ENST00000611056 416 ntBASIC2.69□□□□□ -1.98
PDX1P52945 uc_338.34-201ENST00000617467 174 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.69□□□□□ -1.98
PDX1P52945 AC026585.1-201ENST00000619582 524 ntBASIC2.69□□□□□ -1.98
PDX1P52945 FER-210ENST00000628534 558 ntTSL 5 BASIC2.69□□□□□ -1.98
PDX1P52945 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.69□□□□□ -1.98
PDX1P52945 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.69□□□□□ -1.98
PDX1P52945 AC110079.1-202ENST00000635213 138 ntBASIC2.69□□□□□ -1.98
PDX1P52945 AC110491.1-201ENST00000562191 2010 ntBASIC2.69□□□□□ -1.98
PDX1P52945 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDX1P52945 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PDX1P52945 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDX1P52945 FAM35CP-201ENST00000554755 2470 ntBASIC2.68□□□□□ -1.98
PDX1P52945 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDX1P52945 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PDX1P52945 SNORA51.4-201ENST00000364993 124 ntBASIC2.68□□□□□ -1.98
PDX1P52945 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PDX1P52945 RNU6-45P-201ENST00000384471 107 ntBASIC2.68□□□□□ -1.98
PDX1P52945 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
PDX1P52945 SNORD70.1-201ENST00000391007 85 ntBASIC2.68□□□□□ -1.98
PDX1P52945 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PDX1P52945 AL606923.1-201ENST00000406616 190 ntBASIC2.68□□□□□ -1.98
PDX1P52945 RNU6-193P-201ENST00000410977 107 ntBASIC2.68□□□□□ -1.98
PDX1P52945 EIF1P1-201ENST00000421436 341 ntBASIC2.68□□□□□ -1.98
PDX1P52945 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.68□□□□□ -1.98
PDX1P52945 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
PDX1P52945 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.68□□□□□ -1.98
PDX1P52945 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.68□□□□□ -1.98
PDX1P52945 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.68□□□□□ -1.98
PDX1P52945 AC092989.1-201ENST00000481235 277 ntBASIC2.68□□□□□ -1.98
PDX1P52945 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms