Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.81□□□□□ -1.48
PSEN1P49768 RNU5F-2P-201ENST00000516066 82 ntBASIC5.81□□□□□ -1.48
PSEN1P49768 IGKV2D-19-201ENST00000523346 262 ntBASIC5.81□□□□□ -1.48
PSEN1P49768 AC107918.3-201ENST00000533272 382 ntBASIC5.81□□□□□ -1.48
PSEN1P49768 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.81□□□□□ -1.48
PSEN1P49768 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.81□□□□□ -1.48
PSEN1P49768 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.81□□□□□ -1.48
PSEN1P49768 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PSEN1P49768 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PSEN1P49768 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.81□□□□□ -1.48
PSEN1P49768 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PSEN1P49768 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PSEN1P49768 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PSEN1P49768 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PSEN1P49768 RNU1-75P-201ENST00000347264 129 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 Y_RNA.85-201ENST00000363014 111 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 RNU6-508P-201ENST00000363231 103 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 RNA5SP223-201ENST00000365174 120 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 AC126124.2-201ENST00000413542 321 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 CYCSP48-201ENST00000417124 323 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 AL591419.1-201ENST00000427423 339 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.8□□□□□ -1.48
PSEN1P49768 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.8□□□□□ -1.48
PSEN1P49768 SRIP1-201ENST00000489235 288 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 RPL30P5-201ENST00000494923 336 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 RNU6-1299P-201ENST00000516316 100 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 PRELID2P1-201ENST00000552837 301 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.8□□□□□ -1.48
PSEN1P49768 PCGEM1.1-201ENST00000613431 131 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PSEN1P49768 TLK1P1-201ENST00000456760 2440 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 AC063976.2-201ENST00000425667 3556 ntBASIC5.8□□□□□ -1.48
PSEN1P49768 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PSEN1P49768 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PSEN1P49768 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PSEN1P49768 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PSEN1P49768 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
PSEN1P49768 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PSEN1P49768 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 SNORD114-7-201ENST00000362520 77 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 RN7SKP185-201ENST00000362813 326 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 MIR1271-201ENST00000408537 86 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 PTMAP3-201ENST00000447474 330 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 RN7SL547P-201ENST00000490793 290 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.79□□□□□ -1.48
PSEN1P49768 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 AC122688.1-201ENST00000541494 223 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
PSEN1P49768 AL034555.1-201ENST00000604816 211 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 AC009831.4-201ENST00000620744 325 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 MIR6837-201ENST00000620884 64 ntBASIC5.79□□□□□ -1.48
PSEN1P49768 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PSEN1P49768 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PSEN1P49768 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PSEN1P49768 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PSEN1P49768 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
PSEN1P49768 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PSEN1P49768 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PSEN1P49768 RNA5SP326-201ENST00000363209 110 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 SNORD12C-201ENST00000386307 89 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 AC009804.1-201ENST00000400949 179 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.78□□□□□ -1.48
PSEN1P49768 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.78□□□□□ -1.48
PSEN1P49768 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.78□□□□□ -1.48
PSEN1P49768 RPS27AP10-201ENST00000496103 208 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.78□□□□□ -1.48
PSEN1P49768 RNU6-970P-201ENST00000516312 107 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 SCARNA21.2-201ENST00000516600 166 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.78□□□□□ -1.48
PSEN1P49768 AC007012.1-201ENST00000567192 175 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 AL022345.2-201ENST00000606307 135 ntBASIC5.78□□□□□ -1.48
PSEN1P49768 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PSEN1P49768 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.78□□□□□ -1.48
PSEN1P49768 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.77□□□□□ -1.48
PSEN1P49768 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PSEN1P49768 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PSEN1P49768 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PSEN1P49768 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.77□□□□□ -1.49
PSEN1P49768 RNA5SP125-201ENST00000364843 120 ntBASIC5.77□□□□□ -1.49
PSEN1P49768 RNU6-1323P-201ENST00000384025 107 ntBASIC5.77□□□□□ -1.49
PSEN1P49768 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PSEN1P49768 RNA5SP201-201ENST00000410316 124 ntBASIC5.77□□□□□ -1.49
PSEN1P49768 AL135786.1-201ENST00000415892 214 ntBASIC5.77□□□□□ -1.49
PSEN1P49768 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.77□□□□□ -1.49
PSEN1P49768 RNU6-437P-201ENST00000459408 95 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms