Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRIM1P49642 SNORA29-201ENST00000384183 140 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.83□□□□□ -1.48
PRIM1P49642 AC074290.1-201ENST00000448883 135 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 AC091179.1-201ENST00000461606 579 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 RNU6-1256P-201ENST00000516539 103 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 SNORA43.2-201ENST00000516652 128 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 RNA5SP54-201ENST00000516951 92 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 RNU4-60P-201ENST00000517239 135 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 uc_338.13-201ENST00000618243 179 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 AC112484.5-201ENST00000624189 228 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.83□□□□□ -1.48
PRIM1P49642 snoU18.1-201ENST00000629629 71 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
PRIM1P49642 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRIM1P49642 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PRIM1P49642 AC100821.1-201ENST00000523153 2479 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 CPHL1P-201ENST00000461341 3407 ntBASIC5.83□□□□□ -1.48
PRIM1P49642 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PRIM1P49642 AL672167.1-203ENST00000641299 2975 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.82□□□□□ -1.48
PRIM1P49642 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.82□□□□□ -1.48
PRIM1P49642 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRIM1P49642 AL031595.2-201ENST00000624215 19071 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 RNU5B-2P-201ENST00000363036 113 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 Y_RNA.412-201ENST00000384001 104 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AL356095.1-201ENST00000417217 199 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 RPL30P13-201ENST00000418873 348 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 EBAG9P1-201ENST00000418955 543 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AL138785.1-201ENST00000425821 331 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AL591623.2-201ENST00000449978 222 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.82□□□□□ -1.48
PRIM1P49642 snoU109.2-201ENST00000459316 135 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AC114982.1-201ENST00000469402 321 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 HMGB3P3-201ENST00000510526 400 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 RNA5SP143-201ENST00000516936 115 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 RNU6-58P-201ENST00000517143 103 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 SUMO2P18-201ENST00000518873 252 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.82□□□□□ -1.48
PRIM1P49642 AC233702.2-202ENST00000562547 291 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AC233702.9-201ENST00000581528 203 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 AP002826.1-201ENST00000608835 315 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 MIR8059-201ENST00000620427 81 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRIM1P49642 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRIM1P49642 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.82□□□□□ -1.48
PRIM1P49642 AC110491.1-201ENST00000562191 2010 ntBASIC5.82□□□□□ -1.48
PRIM1P49642 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.82□□□□□ -1.48
PRIM1P49642 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PRIM1P49642 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRIM1P49642 Z95331.1-201ENST00000623075 23112 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.81□□□□□ -1.48
PRIM1P49642 Y_RNA.182-201ENST00000363880 111 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 RNU6-44P-201ENST00000384045 107 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 HLFP1-201ENST00000402375 499 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 EIF4A1P3-201ENST00000411521 244 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 SEPT7P4-201ENST00000437076 306 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 RPL23AP52-201ENST00000439311 478 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.81□□□□□ -1.48
PRIM1P49642 RNU6-191P-201ENST00000516295 94 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 RNU1-45P-201ENST00000517191 141 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.81□□□□□ -1.48
PRIM1P49642 AC131238.1-201ENST00000617135 328 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 MIR6891-201ENST00000618788 93 ntBASIC5.81□□□□□ -1.48
PRIM1P49642 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PRIM1P49642 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PRIM1P49642 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PRIM1P49642 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.81□□□□□ -1.48
PRIM1P49642 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRIM1P49642 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.8□□□□□ -1.48
PRIM1P49642 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PRIM1P49642 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRIM1P49642 RNU6-153P-201ENST00000364422 104 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 SNORD116-14-201ENST00000383894 92 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 SNORD116-17-201ENST00000383929 92 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 U8.10-201ENST00000384260 133 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 SNORD116-15-201ENST00000384445 92 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 SNORD116-20-201ENST00000384529 92 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 SNORD116-19-201ENST00000384729 92 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 SNORA11F-201ENST00000408237 128 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 RPL23AP95-201ENST00000426806 265 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 AL589765.3-201ENST00000446084 462 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PRIM1P49642 AL137159.1-201ENST00000452808 512 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.8□□□□□ -1.48
PRIM1P49642 RN7SKP46-201ENST00000515942 234 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.8□□□□□ -1.48
PRIM1P49642 CYCSP40-201ENST00000575927 294 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.8□□□□□ -1.48
PRIM1P49642 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRIM1P49642 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PRIM1P49642 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.8□□□□□ -1.48
PRIM1P49642 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.8□□□□□ -1.48
PRIM1P49642 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRIM1P49642 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.79□□□□□ -1.48
PRIM1P49642 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.79□□□□□ -1.48
PRIM1P49642 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRIM1P49642 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PRIM1P49642 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms