Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC34P49427 FAM103A2P-201ENST00000444122 354 ntBASIC1.22□□□□□ -2.21
CDC34P49427 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC34P49427 AC092436.1-201ENST00000506450 503 ntBASIC1.22□□□□□ -2.21
CDC34P49427 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC34P49427 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.22□□□□□ -2.21
CDC34P49427 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CDC34P49427 AP004607.1-201ENST00000524456 203 ntBASIC1.22□□□□□ -2.21
CDC34P49427 DEFB108A-201ENST00000530110 222 ntBASIC1.22□□□□□ -2.21
CDC34P49427 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.22□□□□□ -2.21
CDC34P49427 AC092656.1-203ENST00000624134 423 ntBASIC1.22□□□□□ -2.21
CDC34P49427 AC110994.2-201ENST00000635481 492 ntBASIC1.22□□□□□ -2.21
CDC34P49427 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.22□□□□□ -2.21
CDC34P49427 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.21
CDC34P49427 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDC34P49427 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CDC34P49427 Y_RNA.333-201ENST00000365274 102 ntBASIC1.21□□□□□ -2.22
CDC34P49427 SNORA4.3-201ENST00000365564 137 ntBASIC1.21□□□□□ -2.22
CDC34P49427 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
CDC34P49427 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CDC34P49427 RNU6-843P-201ENST00000384454 104 ntBASIC1.21□□□□□ -2.22
CDC34P49427 FCF1P10-201ENST00000407590 479 ntBASIC1.21□□□□□ -2.22
CDC34P49427 Z92545.1-201ENST00000411782 234 ntBASIC1.21□□□□□ -2.22
CDC34P49427 USP9YP33-201ENST00000412220 421 ntBASIC1.21□□□□□ -2.22
CDC34P49427 AC016831.2-201ENST00000417179 352 ntBASIC1.21□□□□□ -2.22
CDC34P49427 AC007098.1-201ENST00000420122 367 ntBASIC1.21□□□□□ -2.22
CDC34P49427 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC34P49427 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC34P49427 USP9YP35-201ENST00000435696 412 ntBASIC1.21□□□□□ -2.22
CDC34P49427 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC34P49427 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC34P49427 AC012308.1-201ENST00000451232 178 ntBASIC1.21□□□□□ -2.22
CDC34P49427 USP9YP10-201ENST00000454868 628 ntBASIC1.21□□□□□ -2.22
CDC34P49427 MTND1P16-201ENST00000465177 898 ntBASIC1.21□□□□□ -2.22
CDC34P49427 AC108729.1-201ENST00000487812 947 ntBASIC1.21□□□□□ -2.22
CDC34P49427 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC34P49427 RNVU1-2-201ENST00000516326 135 ntBASIC1.21□□□□□ -2.22
CDC34P49427 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
CDC34P49427 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC34P49427 BX248123.2-201ENST00000606318 124 ntBASIC1.21□□□□□ -2.22
CDC34P49427 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC34P49427 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.21□□□□□ -2.22
CDC34P49427 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC34P49427 AC018926.1-201ENST00000616335 435 ntBASIC1.21□□□□□ -2.22
CDC34P49427 AC099654.8-201ENST00000637757 681 ntBASIC1.21□□□□□ -2.22
CDC34P49427 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.21□□□□□ -2.22
CDC34P49427 MTND4P23-201ENST00000447723 1363 ntBASIC1.21□□□□□ -2.22
CDC34P49427 RNU1-62P-201ENST00000362599 164 ntBASIC1.2□□□□□ -2.22
CDC34P49427 SNORA63.3-201ENST00000362682 132 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RNU6-1210P-201ENST00000363775 107 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RNU6-560P-201ENST00000364007 108 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RNU6-944P-201ENST00000364023 107 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RNU1-42P-201ENST00000364033 160 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RNA5SP387-201ENST00000364226 106 ntBASIC1.2□□□□□ -2.22
CDC34P49427 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDC34P49427 Y_RNA.534-201ENST00000384599 112 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
CDC34P49427 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDC34P49427 CBX3P9-201ENST00000402326 552 ntBASIC1.2□□□□□ -2.22
CDC34P49427 MIR1304-201ENST00000408243 91 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RNU6-1025P-201ENST00000410629 104 ntBASIC1.2□□□□□ -2.22
CDC34P49427 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC34P49427 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC34P49427 MTCO3P5-201ENST00000433620 714 ntBASIC1.2□□□□□ -2.22
CDC34P49427 RPL7P54-201ENST00000438336 674 ntBASIC1.2□□□□□ -2.22
CDC34P49427 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC34P49427 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC34P49427 RNU6-953P-201ENST00000459154 107 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AC087477.1-201ENST00000465747 340 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.2□□□□□ -2.22
CDC34P49427 RNU6-965P-201ENST00000516721 96 ntBASIC1.2□□□□□ -2.22
CDC34P49427 SNORA31.17-201ENST00000516953 127 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.2□□□□□ -2.22
CDC34P49427 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.2□□□□□ -2.22
CDC34P49427 AC002400.1-201ENST00000569310 726 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AC005668.1-201ENST00000571142 476 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CDC34P49427 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.2□□□□□ -2.22
CDC34P49427 BNIP3P30-201ENST00000601184 574 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AC112220.2-201ENST00000605513 533 ntBASIC1.2□□□□□ -2.22
CDC34P49427 MIR502-201ENST00000606349 86 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AC245297.2-201ENST00000610119 565 ntBASIC1.2□□□□□ -2.22
CDC34P49427 AL392048.1-201ENST00000613946 534 ntBASIC1.2□□□□□ -2.22
CDC34P49427 MIR7974-201ENST00000615835 79 ntBASIC1.2□□□□□ -2.22
CDC34P49427 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDC34P49427 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDC34P49427 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDC34P49427 RNU6-23P-201ENST00000363283 107 ntBASIC1.19□□□□□ -2.22
CDC34P49427 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDC34P49427 MIR583-201ENST00000384846 75 ntBASIC1.19□□□□□ -2.22
CDC34P49427 AL445669.1-201ENST00000426743 755 ntBASIC1.19□□□□□ -2.22
CDC34P49427 AL591704.1-201ENST00000432574 275 ntBASIC1.19□□□□□ -2.22
CDC34P49427 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC34P49427 AP000949.1-201ENST00000438328 629 ntBASIC1.19□□□□□ -2.22
CDC34P49427 RPL31P58-201ENST00000469001 379 ntBASIC1.19□□□□□ -2.22
CDC34P49427 AC021146.8-201ENST00000507455 733 ntBASIC1.19□□□□□ -2.22
CDC34P49427 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.19□□□□□ -2.22
CDC34P49427 MTCYBP40-201ENST00000509390 1135 ntBASIC1.19□□□□□ -2.22
CDC34P49427 RNU6-1315P-201ENST00000517187 99 ntBASIC1.19□□□□□ -2.22
CDC34P49427 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms