Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.33□□□□□ -2.04
ATRXP46100 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 AC018634.1-201ENST00000437554 401 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC009901.1-201ENST00000506703 541 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RNA5SP281-201ENST00000516504 135 ntBASIC2.33□□□□□ -2.04
ATRXP46100 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.33□□□□□ -2.04
ATRXP46100 Y_RNA.702-201ENST00000516843 96 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC011604.1-201ENST00000545978 196 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 MIR4458-201ENST00000578872 75 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.33□□□□□ -2.04
ATRXP46100 COX6CP3-201ENST00000580869 223 ntBASIC2.33□□□□□ -2.04
ATRXP46100 DPPA3P3-201ENST00000603842 430 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AL133255.1-201ENST00000606374 441 ntBASIC2.33□□□□□ -2.04
ATRXP46100 uc_338.5-201ENST00000611839 155 ntBASIC2.33□□□□□ -2.04
ATRXP46100 AP001005.3-201ENST00000622049 129 ntBASIC2.33□□□□□ -2.04
ATRXP46100 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.33□□□□□ -2.04
ATRXP46100 MAPK10-322ENST00000641485 4530 ntBASIC2.33□□□□□ -2.04
ATRXP46100 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ATRXP46100 CASC19-280ENST00000642102 1351 ntBASIC2.33□□□□□ -2.04
ATRXP46100 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATRXP46100 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATRXP46100 RNU6-552P-201ENST00000362869 119 ntBASIC2.32□□□□□ -2.04
ATRXP46100 Y_RNA.167-201ENST00000363735 109 ntBASIC2.32□□□□□ -2.04
ATRXP46100 Y_RNA.184-201ENST00000363884 108 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU6-522P-201ENST00000364497 107 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU6-1032P-201ENST00000384100 107 ntBASIC2.32□□□□□ -2.04
ATRXP46100 Y_RNA.535-201ENST00000384612 99 ntBASIC2.32□□□□□ -2.04
ATRXP46100 Y_RNA.576-201ENST00000384781 102 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU6-1050P-201ENST00000410388 107 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU4-65P-201ENST00000410473 140 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU6-248P-201ENST00000410720 107 ntBASIC2.32□□□□□ -2.04
ATRXP46100 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.32□□□□□ -2.04
ATRXP46100 TAAR7P-201ENST00000436141 242 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RPS15AP27-201ENST00000449183 343 ntBASIC2.32□□□□□ -2.04
ATRXP46100 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.32□□□□□ -2.04
ATRXP46100 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.32□□□□□ -2.04
ATRXP46100 MTND1P9-201ENST00000453775 944 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AMD1P1-201ENST00000457220 922 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.32□□□□□ -2.04
ATRXP46100 HMGB1P41-201ENST00000520234 440 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AP003034.1-201ENST00000534621 422 ntBASIC2.32□□□□□ -2.04
ATRXP46100 PDCD5P1-201ENST00000543528 309 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AP001029.3-201ENST00000588063 596 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC002545.1-201ENST00000592511 181 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AL590099.1-201ENST00000615276 138 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC006504.8-201ENST00000621046 635 ntBASIC2.32□□□□□ -2.04
ATRXP46100 C2orf27A-204ENST00000623058 969 ntBASIC2.32□□□□□ -2.04
ATRXP46100 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.32□□□□□ -2.04
ATRXP46100 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ATRXP46100 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.32□□□□□ -2.04
ATRXP46100 HSPE1P11-201ENST00000339579 310 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU6-797P-201ENST00000363101 109 ntBASIC2.32□□□□□ -2.04
ATRXP46100 Y_RNA.263-201ENST00000364659 114 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU6-534P-201ENST00000364877 106 ntBASIC2.32□□□□□ -2.04
ATRXP46100 RNU4-48P-201ENST00000365559 182 ntBASIC2.32□□□□□ -2.04
ATRXP46100 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
ATRXP46100 RNY4P36-201ENST00000391116 96 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AL590233.1-201ENST00000430017 456 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC002381.1-201ENST00000447049 280 ntBASIC2.32□□□□□ -2.04
ATRXP46100 IFNWP4-201ENST00000453148 294 ntBASIC2.32□□□□□ -2.04
ATRXP46100 MRPS17P3-201ENST00000465453 385 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.32□□□□□ -2.04
ATRXP46100 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.32□□□□□ -2.04
ATRXP46100 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.32□□□□□ -2.04
ATRXP46100 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.32□□□□□ -2.04
ATRXP46100 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.32□□□□□ -2.04
ATRXP46100 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.32□□□□□ -2.04
ATRXP46100 VN1R80P-201ENST00000597126 338 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC103710.2-201ENST00000609912 942 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC040896.1-201ENST00000613819 479 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AL603758.1-201ENST00000618654 241 ntBASIC2.32□□□□□ -2.04
ATRXP46100 AC006111.3-201ENST00000622137 383 ntBASIC2.32□□□□□ -2.04
ATRXP46100 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATRXP46100 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
ATRXP46100 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.32□□□□□ -2.04
ATRXP46100 AC069528.2-201ENST00000624849 1991 ntBASIC2.31□□□□□ -2.04
ATRXP46100 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.31□□□□□ -2.04
ATRXP46100 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
ATRXP46100 OR52B1P-201ENST00000316506 909 ntBASIC2.31□□□□□ -2.04
ATRXP46100 Y_RNA.157-201ENST00000363638 102 ntBASIC2.31□□□□□ -2.04
ATRXP46100 Y_RNA.259-201ENST00000364619 101 ntBASIC2.31□□□□□ -2.04
ATRXP46100 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ATRXP46100 RNU6-946P-201ENST00000383878 107 ntBASIC2.31□□□□□ -2.04
ATRXP46100 MIR583-201ENST00000384846 75 ntBASIC2.31□□□□□ -2.04
ATRXP46100 MIR625-201ENST00000385047 85 ntBASIC2.31□□□□□ -2.04
ATRXP46100 RNU6-101P-201ENST00000410323 104 ntBASIC2.31□□□□□ -2.04
ATRXP46100 RNU6-603P-201ENST00000411403 107 ntBASIC2.31□□□□□ -2.04
ATRXP46100 UBE2V1P13-201ENST00000436983 439 ntBASIC2.31□□□□□ -2.04
ATRXP46100 RPS29P6-201ENST00000438196 145 ntBASIC2.31□□□□□ -2.04
ATRXP46100 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
ATRXP46100 RNA5SP401-201ENST00000515920 127 ntBASIC2.31□□□□□ -2.04
ATRXP46100 RNA5SP471-201ENST00000516971 106 ntBASIC2.31□□□□□ -2.04
ATRXP46100 AL355812.1-201ENST00000603215 216 ntBASIC2.31□□□□□ -2.04
ATRXP46100 AC013553.2-201ENST00000604244 589 ntBASIC2.31□□□□□ -2.04
ATRXP46100 AC024940.5-201ENST00000622889 474 ntBASIC2.31□□□□□ -2.04
ATRXP46100 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.31□□□□□ -2.04
ATRXP46100 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ATRXP46100 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms