Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
HTTP42858 MIR224-201ENST00000384889 81 ntBASIC0.08□□□□□ -2.4
HTTP42858 MT-TQ-201ENST00000387372 72 ntBASIC0.08□□□□□ -2.4
HTTP42858 RPS15AP40-201ENST00000419621 391 ntBASIC0.08□□□□□ -2.4
HTTP42858 AC099677.1-201ENST00000420575 175 ntBASIC0.08□□□□□ -2.4
HTTP42858 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.08□□□□□ -2.4
HTTP42858 AC092047.1-201ENST00000424997 240 ntBASIC0.08□□□□□ -2.4
HTTP42858 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.08□□□□□ -2.4
HTTP42858 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.08□□□□□ -2.4
HTTP42858 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.08□□□□□ -2.4
HTTP42858 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.08□□□□□ -2.4
HTTP42858 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.08□□□□□ -2.4
HTTP42858 AL359385.1-201ENST00000456509 365 ntBASIC0.08□□□□□ -2.4
HTTP42858 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.08□□□□□ -2.4
HTTP42858 SCARNA11.3-201ENST00000517276 130 ntBASIC0.08□□□□□ -2.4
HTTP42858 AC011155.2-201ENST00000623202 216 ntBASIC0.08□□□□□ -2.4
HTTP42858 AC245060.5-201ENST00000610778 3293 ntBASIC0.07□□□□□ -2.4
HTTP42858 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
HTTP42858 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
HTTP42858 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
HTTP42858 Y_RNA.583-201ENST00000391033 113 ntBASIC0.07□□□□□ -2.4
HTTP42858 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.07□□□□□ -2.4
HTTP42858 PGBD4P5-201ENST00000445958 426 ntBASIC0.07□□□□□ -2.4
HTTP42858 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
HTTP42858 SCARNA16.2-201ENST00000516520 172 ntBASIC0.07□□□□□ -2.4
HTTP42858 MIR5093-201ENST00000583199 100 ntBASIC0.07□□□□□ -2.4
HTTP42858 Z83818.1-201ENST00000603584 150 ntBASIC0.07□□□□□ -2.4
HTTP42858 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.07□□□□□ -2.4
HTTP42858 RNA5SP391-201ENST00000363456 119 ntBASIC0.07□□□□□ -2.4
HTTP42858 HNRNPDP2-201ENST00000406475 478 ntBASIC0.07□□□□□ -2.4
HTTP42858 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.07□□□□□ -2.4
HTTP42858 AC005832.2-201ENST00000538921 1430 ntBASIC0.07□□□□□ -2.4
HTTP42858 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.07□□□□□ -2.4
HTTP42858 MIR3609-201ENST00000582661 80 ntBASIC0.07□□□□□ -2.4
HTTP42858 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.07□□□□□ -2.4
HTTP42858 AC068790.6-201ENST00000602558 258 ntBASIC0.07□□□□□ -2.4
HTTP42858 AC012213.4-201ENST00000606457 354 ntBASIC0.07□□□□□ -2.4
HTTP42858 AC027335.2-201ENST00000624030 375 ntBASIC0.07□□□□□ -2.4
HTTP42858 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
HTTP42858 Y_RNA.551-201ENST00000384661 102 ntBASIC0.07□□□□□ -2.4
HTTP42858 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.07□□□□□ -2.4
HTTP42858 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.07□□□□□ -2.4
HTTP42858 AL096803.2-201ENST00000450032 677 ntBASIC0.07□□□□□ -2.4
HTTP42858 snoU13.28-201ENST00000459235 104 ntBASIC0.07□□□□□ -2.4
HTTP42858 TRBV8-1-201ENST00000481590 279 ntBASIC0.07□□□□□ -2.4
HTTP42858 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.07□□□□□ -2.4
HTTP42858 MTCYBP16-201ENST00000509187 1129 ntBASIC0.07□□□□□ -2.4
HTTP42858 AC093677.1-201ENST00000514414 678 ntBASIC0.07□□□□□ -2.4
HTTP42858 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.07□□□□□ -2.4
HTTP42858 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.07□□□□□ -2.4
HTTP42858 AL359212.1-201ENST00000556608 614 ntBASIC0.07□□□□□ -2.4
HTTP42858 DUXAP1-201ENST00000556632 463 ntBASIC0.07□□□□□ -2.4
HTTP42858 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.07□□□□□ -2.4
HTTP42858 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
HTTP42858 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
HTTP42858 SNORD114-3-201ENST00000364969 75 ntBASIC0.06□□□□□ -2.4
HTTP42858 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
HTTP42858 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
HTTP42858 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
HTTP42858 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.06□□□□□ -2.4
HTTP42858 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.06□□□□□ -2.4
HTTP42858 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.06□□□□□ -2.4
HTTP42858 RN7SKP277-201ENST00000516895 283 ntBASIC0.06□□□□□ -2.4
HTTP42858 IGKV1-22-201ENST00000524313 326 ntBASIC0.06□□□□□ -2.4
HTTP42858 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.06□□□□□ -2.4
HTTP42858 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.06□□□□□ -2.4
HTTP42858 AC004852.3-201ENST00000614131 326 ntBASIC0.06□□□□□ -2.4
HTTP42858 AC093913.1-201ENST00000614178 329 ntBASIC0.06□□□□□ -2.4
HTTP42858 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.06□□□□□ -2.4
HTTP42858 AL360181.4-201ENST00000621752 134 ntBASIC0.06□□□□□ -2.4
HTTP42858 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
HTTP42858 MIR7157-201ENST00000635801 60 ntBASIC0.06□□□□□ -2.4
HTTP42858 RNU5D-1-201ENST00000363299 116 ntBASIC0.06□□□□□ -2.4
HTTP42858 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
HTTP42858 AL136372.1-201ENST00000403060 228 ntBASIC0.06□□□□□ -2.4
HTTP42858 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.06□□□□□ -2.4
HTTP42858 CETN4P-201ENST00000432407 469 ntBASIC0.06□□□□□ -2.4
HTTP42858 NDUFB4P10-201ENST00000452541 359 ntBASIC0.06□□□□□ -2.4
HTTP42858 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.06□□□□□ -2.4
HTTP42858 LSM6P2-201ENST00000552208 177 ntBASIC0.06□□□□□ -2.4
HTTP42858 AC022254.1-201ENST00000567857 235 ntBASIC0.06□□□□□ -2.4
HTTP42858 AP001596.2-201ENST00000608410 312 ntBASIC0.06□□□□□ -2.4
HTTP42858 AC100810.6-201ENST00000638068 285 ntBASIC0.06□□□□□ -2.4
HTTP42858 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
HTTP42858 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
HTTP42858 MICF-203ENST00000432679 129 ntBASIC0.05□□□□□ -2.4
HTTP42858 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.05□□□□□ -2.4
HTTP42858 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.05□□□□□ -2.4
HTTP42858 AC087481.2-201ENST00000565492 330 ntBASIC0.05□□□□□ -2.4
HTTP42858 AL162730.1-201ENST00000605734 292 ntBASIC0.05□□□□□ -2.4
HTTP42858 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.05□□□□□ -2.4
HTTP42858 RNU6-1222P-201ENST00000384615 107 ntBASIC0.05□□□□□ -2.4
HTTP42858 SNORA32.3-201ENST00000384772 121 ntBASIC0.05□□□□□ -2.4
HTTP42858 HMGN2P39-201ENST00000398005 273 ntBASIC0.05□□□□□ -2.4
HTTP42858 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.05□□□□□ -2.4
HTTP42858 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.05□□□□□ -2.4
HTTP42858 AC006548.1-201ENST00000427470 102 ntBASIC0.05□□□□□ -2.4
HTTP42858 AC027119.1-201ENST00000440877 241 ntBASIC0.05□□□□□ -2.4
HTTP42858 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.05□□□□□ -2.4
HTTP42858 AL049830.1-201ENST00000468034 425 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms