Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
LTBRP36941 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.94□□□□□ -1.78
LTBRP36941 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
LTBRP36941 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LTBRP36941 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LTBRP36941 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.94□□□□□ -1.78
LTBRP36941 SNORD9-201ENST00000362566 104 ntBASIC3.94□□□□□ -1.78
LTBRP36941 SNORD50.1-201ENST00000362987 71 ntBASIC3.94□□□□□ -1.78
LTBRP36941 RNU6-217P-201ENST00000384164 104 ntBASIC3.94□□□□□ -1.78
LTBRP36941 Y_RNA.512-201ENST00000384518 102 ntBASIC3.94□□□□□ -1.78
LTBRP36941 RNU6-658P-201ENST00000384606 106 ntBASIC3.94□□□□□ -1.78
LTBRP36941 RNA5SP31-201ENST00000411144 127 ntBASIC3.94□□□□□ -1.78
LTBRP36941 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.94□□□□□ -1.78
LTBRP36941 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.94□□□□□ -1.78
LTBRP36941 RPL21P2-201ENST00000440049 481 ntBASIC3.94□□□□□ -1.78
LTBRP36941 RBMY2UP-201ENST00000453474 324 ntBASIC3.94□□□□□ -1.78
LTBRP36941 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.94□□□□□ -1.78
LTBRP36941 FTH1P9-201ENST00000513251 355 ntBASIC3.94□□□□□ -1.78
LTBRP36941 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.94□□□□□ -1.78
LTBRP36941 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.94□□□□□ -1.78
LTBRP36941 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.94□□□□□ -1.78
LTBRP36941 MIR3668-201ENST00000582138 75 ntBASIC3.94□□□□□ -1.78
LTBRP36941 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.94□□□□□ -1.78
LTBRP36941 VN1R91P-201ENST00000594377 169 ntBASIC3.94□□□□□ -1.78
LTBRP36941 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.94□□□□□ -1.78
LTBRP36941 HMGB1P50-201ENST00000605814 607 ntBASIC3.94□□□□□ -1.78
LTBRP36941 AC009318.2-201ENST00000610917 651 ntBASIC3.94□□□□□ -1.78
LTBRP36941 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.94□□□□□ -1.78
LTBRP36941 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.94□□□□□ -1.78
LTBRP36941 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LTBRP36941 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.94□□□□□ -1.78
LTBRP36941 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LTBRP36941 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.94□□□□□ -1.78
LTBRP36941 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LTBRP36941 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LTBRP36941 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LTBRP36941 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.93□□□□□ -1.78
LTBRP36941 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 RNU6-227P-201ENST00000362865 103 ntBASIC3.93□□□□□ -1.78
LTBRP36941 Y_RNA.556-201ENST00000384677 113 ntBASIC3.93□□□□□ -1.78
LTBRP36941 MIR195-201ENST00000385194 87 ntBASIC3.93□□□□□ -1.78
LTBRP36941 MIR1289-1-201ENST00000408836 144 ntBASIC3.93□□□□□ -1.78
LTBRP36941 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBRP36941 CBX3P6-201ENST00000430257 527 ntBASIC3.93□□□□□ -1.78
LTBRP36941 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBRP36941 HMGB1P37-201ENST00000439613 609 ntBASIC3.93□□□□□ -1.78
LTBRP36941 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.93□□□□□ -1.78
LTBRP36941 MTCO3P8-201ENST00000453691 755 ntBASIC3.93□□□□□ -1.78
LTBRP36941 RPS29P27-201ENST00000463711 170 ntBASIC3.93□□□□□ -1.78
LTBRP36941 AC093852.1-201ENST00000503587 266 ntBASIC3.93□□□□□ -1.78
LTBRP36941 AC010186.2-204ENST00000537668 439 ntBASIC3.93□□□□□ -1.78
LTBRP36941 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.93□□□□□ -1.78
LTBRP36941 AC006077.1-201ENST00000604746 343 ntBASIC3.93□□□□□ -1.78
LTBRP36941 AL137849.1-201ENST00000604767 169 ntBASIC3.93□□□□□ -1.78
LTBRP36941 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBRP36941 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.93□□□□□ -1.78
LTBRP36941 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LTBRP36941 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LTBRP36941 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.93□□□□□ -1.78
LTBRP36941 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LTBRP36941 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
LTBRP36941 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 Y_RNA.188-201ENST00000363952 111 ntBASIC3.92□□□□□ -1.78
LTBRP36941 RPS29P13-201ENST00000402041 169 ntBASIC3.92□□□□□ -1.78
LTBRP36941 U3.37-201ENST00000408528 213 ntBASIC3.92□□□□□ -1.78
LTBRP36941 OSTCP8-201ENST00000445117 448 ntBASIC3.92□□□□□ -1.78
LTBRP36941 RPL21P10-201ENST00000463521 490 ntBASIC3.92□□□□□ -1.78
LTBRP36941 UBE2DNL-203ENST00000474922 222 ntBASIC3.92□□□□□ -1.78
LTBRP36941 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.92□□□□□ -1.78
LTBRP36941 RNU2-58P-201ENST00000516403 183 ntBASIC3.92□□□□□ -1.78
LTBRP36941 AC090281.1-201ENST00000523019 276 ntBASIC3.92□□□□□ -1.78
LTBRP36941 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.92□□□□□ -1.78
LTBRP36941 LINC00933-203ENST00000559812 219 ntBASIC3.92□□□□□ -1.78
LTBRP36941 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.92□□□□□ -1.78
LTBRP36941 AC012493.2-201ENST00000595083 291 ntBASIC3.92□□□□□ -1.78
LTBRP36941 AC008962.1-201ENST00000605729 304 ntBASIC3.92□□□□□ -1.78
LTBRP36941 SNORA62.6-201ENST00000606322 83 ntBASIC3.92□□□□□ -1.78
LTBRP36941 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.92□□□□□ -1.78
LTBRP36941 U2.1-201ENST00000618978 145 ntBASIC3.92□□□□□ -1.78
LTBRP36941 AL713922.2-201ENST00000619384 716 ntBASIC3.92□□□□□ -1.78
LTBRP36941 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LTBRP36941 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LTBRP36941 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms