Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC104850.1-201ENST00000435940 476 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AL451074.3-201ENST00000437709 472 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AC104389.3-201ENST00000445629 235 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC13P31276 PMCHL2-203ENST00000457791 237 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC13P31276 RNU4-29P-201ENST00000515943 174 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 RNA5SP165-201ENST00000517142 115 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 BTF3P12-201ENST00000519620 469 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 MTND1P35-201ENST00000526739 508 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC13P31276 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC13P31276 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXC13P31276 AC007151.1-201ENST00000572774 483 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AC137800.2-201ENST00000574375 120 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 MIR5697-201ENST00000578045 78 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 MIR3671-201ENST00000580455 88 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXC13P31276 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC13P31276 AL355598.1-201ENST00000604169 202 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AC007619.2-201ENST00000605743 379 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 RNU6-87P-201ENST00000607561 108 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 BX664608.1-201ENST00000610519 487 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AC091953.2-201ENST00000623979 160 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 MIR3199-2-201ENST00000636243 86 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXC13P31276 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HOXC13P31276 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXC13P31276 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXC13P31276 AC110491.1-201ENST00000562191 2010 ntBASIC2.97□□□□□ -1.93
HOXC13P31276 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
HOXC13P31276 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC13P31276 RNU1-35P-201ENST00000362782 153 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 Y_RNA.89-201ENST00000363031 102 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 RNU1-112P-201ENST00000364401 164 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 RNU6-534P-201ENST00000364877 106 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 RNU5E-5P-201ENST00000365379 116 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 Y_RNA.573-201ENST00000384763 105 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AL445529.1-201ENST00000398713 389 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXC13P31276 RPL26P27-201ENST00000414397 437 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 RPS15AP12-201ENST00000419498 388 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC13P31276 MTCO1P20-201ENST00000425366 358 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC13P31276 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC13P31276 RPS20P5-201ENST00000434808 360 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 RPS29P6-201ENST00000438196 145 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC13P31276 NIPA2P5-201ENST00000452282 464 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AL033528.1-201ENST00000453780 140 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 SNORD109B-201ENST00000458961 67 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 SNORD109A-201ENST00000459128 67 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 TRBV12-1-201ENST00000479785 344 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 RPS29P20-201ENST00000489592 171 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HOXC13P31276 MTCO3P9-201ENST00000506989 781 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC13P31276 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.96□□□□□ -1.94
HOXC13P31276 RNU6-143P-201ENST00000516942 93 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 FAM92A1P1-201ENST00000528023 890 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXC13P31276 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC13P31276 AL442663.2-201ENST00000554385 511 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC13P31276 RPS3AP23-202ENST00000574601 686 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC13P31276 AC060780.3-201ENST00000589464 80 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AC005261.5-201ENST00000596280 355 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AC090115.4-201ENST00000609970 188 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 AC008250.2-201ENST00000615261 205 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXC13P31276 AC090574.1-201ENST00000623186 233 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
HOXC13P31276 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC13P31276 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC13P31276 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC13P31276 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HOXC13P31276 Y_RNA.409-201ENST00000383990 98 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 RNU6-332P-201ENST00000391193 108 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 AL356776.1-201ENST00000406574 447 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 AL451074.5-201ENST00000415894 435 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXC13P31276 AC087499.2-201ENST00000432861 149 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 USP9YP12-201ENST00000450481 570 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 RNU6-953P-201ENST00000459154 107 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 AC019235.1-201ENST00000503847 207 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 AC108078.1-201ENST00000508073 725 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 RNU1-41P-201ENST00000516161 162 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 RNU1-48P-201ENST00000516400 162 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 RNU6-430P-201ENST00000517078 107 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 AP003072.1-201ENST00000531740 145 ntBASIC2.95□□□□□ -1.94
HOXC13P31276 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.95□□□□□ -1.94
HOXC13P31276 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC13P31276 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HOXC13P31276 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXC13P31276 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.95□□□□□ -1.94
HOXC13P31276 Y_RNA.812-201ENST00000610788 101 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms