Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR1244-1-201ENST00000612829 85 ntBASIC4.81□□□□□ -1.64
RXRBP28702 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.81□□□□□ -1.64
RXRBP28702 AC127459.3-201ENST00000624328 466 ntBASIC4.81□□□□□ -1.64
RXRBP28702 MIR1244-3-201ENST00000635744 85 ntBASIC4.81□□□□□ -1.64
RXRBP28702 MIR1244-2-201ENST00000636449 85 ntBASIC4.81□□□□□ -1.64
RXRBP28702 MIR1244-4-202ENST00000636813 85 ntBASIC4.81□□□□□ -1.64
RXRBP28702 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.81□□□□□ -1.64
RXRBP28702 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RXRBP28702 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RXRBP28702 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RXRBP28702 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.81□□□□□ -1.64
RXRBP28702 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.81□□□□□ -1.64
RXRBP28702 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.8□□□□□ -1.64
RXRBP28702 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RXRBP28702 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RXRBP28702 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RXRBP28702 RNU6-989P-201ENST00000362756 107 ntBASIC4.8□□□□□ -1.64
RXRBP28702 Y_RNA.270-201ENST00000364693 104 ntBASIC4.8□□□□□ -1.64
RXRBP28702 Y_RNA.291-201ENST00000364886 113 ntBASIC4.8□□□□□ -1.64
RXRBP28702 Y_RNA.464-201ENST00000384282 110 ntBASIC4.8□□□□□ -1.64
RXRBP28702 Y_RNA.480-201ENST00000384364 102 ntBASIC4.8□□□□□ -1.64
RXRBP28702 MIR215-201ENST00000384858 110 ntBASIC4.8□□□□□ -1.64
RXRBP28702 DBIP2-201ENST00000419076 262 ntBASIC4.8□□□□□ -1.64
RXRBP28702 EIF4EP2-201ENST00000422816 654 ntBASIC4.8□□□□□ -1.64
RXRBP28702 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RXRBP28702 DAP3P1-201ENST00000441522 278 ntBASIC4.8□□□□□ -1.64
RXRBP28702 NEFMP1-201ENST00000443423 1006 ntBASIC4.8□□□□□ -1.64
RXRBP28702 RPL21P41-201ENST00000459863 264 ntBASIC4.8□□□□□ -1.64
RXRBP28702 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.8□□□□□ -1.64
RXRBP28702 NDUFB4P9-201ENST00000511646 388 ntBASIC4.8□□□□□ -1.64
RXRBP28702 Y_RNA.687-201ENST00000516558 91 ntBASIC4.8□□□□□ -1.64
RXRBP28702 RN7SKP60-201ENST00000516985 239 ntBASIC4.8□□□□□ -1.64
RXRBP28702 RNU6-1212P-201ENST00000517023 104 ntBASIC4.8□□□□□ -1.64
RXRBP28702 AF186190.1-201ENST00000517470 480 ntBASIC4.8□□□□□ -1.64
RXRBP28702 AC034114.1-201ENST00000520293 285 ntBASIC4.8□□□□□ -1.64
RXRBP28702 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.8□□□□□ -1.64
RXRBP28702 AL158827.2-201ENST00000602494 330 ntBASIC4.8□□□□□ -1.64
RXRBP28702 AL390123.1-201ENST00000603216 237 ntBASIC4.8□□□□□ -1.64
RXRBP28702 RNU6-85P-201ENST00000605989 107 ntBASIC4.8□□□□□ -1.64
RXRBP28702 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.8□□□□□ -1.64
RXRBP28702 AL591516.1-201ENST00000611326 274 ntBASIC4.8□□□□□ -1.64
RXRBP28702 AC006329.2-201ENST00000611491 394 ntBASIC4.8□□□□□ -1.64
RXRBP28702 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.8□□□□□ -1.64
RXRBP28702 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.8□□□□□ -1.64
RXRBP28702 AL691447.3-201ENST00000635020 330 ntBASIC4.8□□□□□ -1.64
RXRBP28702 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.8□□□□□ -1.64
RXRBP28702 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RXRBP28702 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RXRBP28702 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RXRBP28702 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RXRBP28702 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RXRBP28702 MIR335-201ENST00000362173 94 ntBASIC4.79□□□□□ -1.64
RXRBP28702 Y_RNA.183-201ENST00000363882 113 ntBASIC4.79□□□□□ -1.64
RXRBP28702 Y_RNA.237-201ENST00000364439 102 ntBASIC4.79□□□□□ -1.64
RXRBP28702 Y_RNA.471-201ENST00000384312 102 ntBASIC4.79□□□□□ -1.64
RXRBP28702 AL139156.1-201ENST00000412785 841 ntBASIC4.79□□□□□ -1.64
RXRBP28702 AC092447.6-201ENST00000414578 210 ntBASIC4.79□□□□□ -1.64
RXRBP28702 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.79□□□□□ -1.64
RXRBP28702 SNORA71B-202ENST00000439232 272 ntBASIC4.79□□□□□ -1.64
RXRBP28702 GEMIN8P3-201ENST00000445417 720 ntBASIC4.79□□□□□ -1.64
RXRBP28702 AP000926.1-201ENST00000479573 241 ntBASIC4.79□□□□□ -1.64
RXRBP28702 AC113155.1-201ENST00000511141 769 ntBASIC4.79□□□□□ -1.64
RXRBP28702 RN7SKP277-201ENST00000516895 283 ntBASIC4.79□□□□□ -1.64
RXRBP28702 MTND6P33-201ENST00000571794 183 ntBASIC4.79□□□□□ -1.64
RXRBP28702 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.79□□□□□ -1.64
RXRBP28702 AC067852.4-201ENST00000590314 478 ntBASIC4.79□□□□□ -1.64
RXRBP28702 AC073410.2-201ENST00000603240 332 ntBASIC4.79□□□□□ -1.64
RXRBP28702 LINC00901.1-201ENST00000617252 152 ntBASIC4.79□□□□□ -1.64
RXRBP28702 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
RXRBP28702 AC027290.2-201ENST00000623210 18662 ntBASIC4.79□□□□□ -1.64
RXRBP28702 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RXRBP28702 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RXRBP28702 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RXRBP28702 DDX10P1-201ENST00000448545 1933 ntBASIC4.78□□□□□ -1.64
RXRBP28702 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RXRBP28702 RNU6-1159P-201ENST00000362933 107 ntBASIC4.78□□□□□ -1.64
RXRBP28702 RNU6-708P-201ENST00000384217 107 ntBASIC4.78□□□□□ -1.64
RXRBP28702 RNU6-125P-201ENST00000384505 107 ntBASIC4.78□□□□□ -1.64
RXRBP28702 MIR1250-201ENST00000408098 113 ntBASIC4.78□□□□□ -1.64
RXRBP28702 AL606753.1-201ENST00000427435 87 ntBASIC4.78□□□□□ -1.64
RXRBP28702 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.78□□□□□ -1.64
RXRBP28702 SETP5-201ENST00000437270 562 ntBASIC4.78□□□□□ -1.64
RXRBP28702 AL360271.2-201ENST00000447710 161 ntBASIC4.78□□□□□ -1.64
RXRBP28702 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.78□□□□□ -1.64
RXRBP28702 RPL31P60-201ENST00000478450 367 ntBASIC4.78□□□□□ -1.64
RXRBP28702 RAC1P2-201ENST00000511164 579 ntBASIC4.78□□□□□ -1.64
RXRBP28702 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.78□□□□□ -1.64
RXRBP28702 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.78□□□□□ -1.64
RXRBP28702 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.78□□□□□ -1.64
RXRBP28702 AL360157.1-201ENST00000565962 87 ntBASIC4.78□□□□□ -1.64
RXRBP28702 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.78□□□□□ -1.64
RXRBP28702 AP000553.6-201ENST00000641242 118 ntBASIC4.78□□□□□ -1.64
RXRBP28702 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RXRBP28702 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RXRBP28702 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RXRBP28702 AL672167.1-203ENST00000641299 2975 ntBASIC4.77□□□□□ -1.65
RXRBP28702 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RXRBP28702 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RXRBP28702 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RXRBP28702 snoU2_19.2-201ENST00000363024 80 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms