Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL512643.1-201ENST00000635735 524 ntBASIC1.58□□□□□ -2.16
HLA-DMAP28067 WWP1P1-201ENST00000466609 2769 ntBASIC1.58□□□□□ -2.16
HLA-DMAP28067 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DMAP28067 RNU4-1-201ENST00000363925 141 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 RNU6-533P-201ENST00000384144 107 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 SNORA64-201ENST00000384674 134 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 RPS27AP14-201ENST00000422868 454 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 AL353706.1-201ENST00000436728 494 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 RPL22P17-201ENST00000438729 315 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 SSXP1-201ENST00000453640 473 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 AC093899.1-201ENST00000457984 376 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 SNORD11.1-201ENST00000459482 85 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 RPL37P6-201ENST00000460682 294 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 AL049873.1-201ENST00000480540 376 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 MIR5697-201ENST00000578045 78 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.57□□□□□ -2.16
HLA-DMAP28067 MIR15A-201ENST00000607334 83 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 AC034229.4-201ENST00000607861 441 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 MIR6134-201ENST00000617606 109 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 AC010149.2-201ENST00000637608 315 ntBASIC1.57□□□□□ -2.16
HLA-DMAP28067 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DMAP28067 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DMAP28067 RNU6-500P-201ENST00000362349 107 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 RNU5F-6P-201ENST00000362979 116 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 RNU4-42P-201ENST00000364738 142 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 RNU6-166P-201ENST00000384371 107 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 RNU2-62P-201ENST00000410868 191 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC127391.1-201ENST00000411737 98 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 VN1R36P-201ENST00000414936 291 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 AL591212.2-201ENST00000433923 257 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 AL590365.1-201ENST00000450788 243 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 RPL21P99-201ENST00000480369 423 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC008834.1-201ENST00000511612 175 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 RNU6-1092P-201ENST00000516955 87 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 ACA59.2-201ENST00000517061 156 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 SNORA31.19-201ENST00000517079 126 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 AP003122.4-201ENST00000530980 758 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 GNAI2P1-201ENST00000541815 315 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 NDUFA5P6-201ENST00000542110 379 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC012213.3-201ENST00000577199 777 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 YWHAEP7-203ENST00000622054 312 ntBASIC1.56□□□□□ -2.16
HLA-DMAP28067 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DMAP28067 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNU5E-1-201ENST00000362477 120 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNU6-1280P-201ENST00000365211 107 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNU6-39P-201ENST00000384344 107 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNU6-817P-201ENST00000391083 104 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 SNORA40C-201ENST00000391285 128 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RPL23AP39-201ENST00000415533 405 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC016831.2-201ENST00000417179 352 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AL445646.1-201ENST00000431784 216 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DMAP28067 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AL008629.1-201ENST00000438615 184 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DMAP28067 KATNBL1P6-201ENST00000453433 915 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 ZNF114P1-201ENST00000453500 292 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 SNORD97-201ENST00000459187 142 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC112771.1-201ENST00000463581 102 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC109927.2-201ENST00000506416 303 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 MTND4P2-201ENST00000507767 1203 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNU6-143P-201ENST00000516942 93 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 RNA5SP337-201ENST00000517007 109 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DMAP28067 RANP3-201ENST00000530970 276 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.55□□□□□ -2.16
HLA-DMAP28067 AC007375.1-201ENST00000554513 578 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 PSMA3P-201ENST00000555485 635 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 MIR3162-201ENST00000581818 82 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AL670379.6-201ENST00000603753 252 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 SNRPGP17-201ENST00000603780 214 ntBASIC1.55□□□□□ -2.16
HLA-DMAP28067 AL670379.11-201ENST00000604059 253 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms