Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC099506.2-201ENST00000623074 221 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC107027.3-201ENST00000565095 3473 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.59□□□□□ -1.83
POLR2AP24928 AL049641.1-201ENST00000441055 1948 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.59□□□□□ -1.83
POLR2AP24928 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
POLR2AP24928 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.59□□□□□ -1.83
POLR2AP24928 RNU1-115P-201ENST00000365329 160 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 Y_RNA.399-201ENST00000383955 105 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 AC092447.6-201ENST00000414578 210 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.59□□□□□ -1.83
POLR2AP24928 MYL8P-204ENST00000431574 518 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.59□□□□□ -1.83
POLR2AP24928 CST9LP2-201ENST00000437612 320 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.59□□□□□ -1.83
POLR2AP24928 AC128713.1-201ENST00000471495 306 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 AC108078.2-201ENST00000510750 236 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 SNORD116-26-201ENST00000516006 96 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.59□□□□□ -1.83
POLR2AP24928 BNIP3P16-201ENST00000589779 534 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 AL669831.4-202ENST00000590817 238 ntBASIC3.59□□□□□ -1.83
POLR2AP24928 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.59□□□□□ -1.83
POLR2AP24928 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.59□□□□□ -1.83
POLR2AP24928 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
POLR2AP24928 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.59□□□□□ -1.83
POLR2AP24928 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
POLR2AP24928 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
POLR2AP24928 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR2AP24928 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.58□□□□□ -1.84
POLR2AP24928 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR2AP24928 RNU6-859P-201ENST00000362728 107 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 RNU6-356P-201ENST00000384140 107 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 RNU6-1109P-201ENST00000391187 107 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 RNU2-36P-201ENST00000410361 191 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR2AP24928 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR2AP24928 AC004383.1-201ENST00000438135 289 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR2AP24928 AC104564.1-201ENST00000493028 407 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 RNU6-307P-201ENST00000516743 106 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
POLR2AP24928 AC138761.3-201ENST00000579993 334 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AC011494.1-201ENST00000596454 237 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR2AP24928 AC107871.2-201ENST00000612894 502 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR2AP24928 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.58□□□□□ -1.84
POLR2AP24928 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
POLR2AP24928 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR2AP24928 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
POLR2AP24928 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
POLR2AP24928 ZNF734P-201ENST00000419494 1534 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
POLR2AP24928 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
POLR2AP24928 SNORA70B-201ENST00000384210 135 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 Y_RNA.455-201ENST00000384230 98 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 RNU6-293P-201ENST00000411259 106 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AC004866.2-201ENST00000438285 481 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 OSTCP8-201ENST00000445117 448 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR2AP24928 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.58□□□□□ -1.84
POLR2AP24928 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR2AP24928 HMGB3P30-201ENST00000457863 606 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 snoU109.4-201ENST00000458953 143 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 RPL37P6-202ENST00000464216 403 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AC135721.1-201ENST00000497954 479 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR2AP24928 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
POLR2AP24928 Y_RNA.715-201ENST00000517082 110 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.58□□□□□ -1.84
POLR2AP24928 AL365434.2-201ENST00000607979 234 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AC011890.2-201ENST00000613393 294 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 AL161423.1-201ENST00000613700 262 ntBASIC3.58□□□□□ -1.84
POLR2AP24928 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 RNU6-890P-201ENST00000384121 107 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 RNU6-214P-201ENST00000384130 107 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 NDUFS5P1-201ENST00000405668 289 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 HMGB3P2-201ENST00000411913 584 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 UBE2FP1-201ENST00000416536 447 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 AC011005.2-201ENST00000487324 359 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 AC104136.1-201ENST00000512969 394 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 SCARNA16.2-201ENST00000516520 172 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 RNU6-1213P-201ENST00000517075 94 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 DEFB108D-201ENST00000527787 222 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 AC126177.3-201ENST00000551839 688 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 AC062037.2-201ENST00000610137 73 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 AL359893.1-201ENST00000447628 1580 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
POLR2AP24928 NCAPGP1-201ENST00000505112 1814 ntBASIC3.57□□□□□ -1.84
POLR2AP24928 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms