Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC099506.2-201ENST00000623074 221 ntBASIC3.74□□□□□ -1.81
XPAP23025 AL034408.1-202ENST00000636088 415 ntBASIC3.74□□□□□ -1.81
XPAP23025 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
XPAP23025 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
XPAP23025 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
XPAP23025 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.73□□□□□ -1.81
XPAP23025 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
XPAP23025 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
XPAP23025 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.73□□□□□ -1.81
XPAP23025 AL161912.2-201ENST00000565707 3007 ntBASIC3.73□□□□□ -1.81
XPAP23025 AL133396.1-201ENST00000432048 687 ntBASIC3.73□□□□□ -1.81
XPAP23025 ATP5HP2-201ENST00000433885 485 ntBASIC3.73□□□□□ -1.81
XPAP23025 AL590664.1-201ENST00000448065 339 ntBASIC3.73□□□□□ -1.81
XPAP23025 AL136097.1-201ENST00000456945 913 ntBASIC3.73□□□□□ -1.81
XPAP23025 snoU109.2-201ENST00000459316 135 ntBASIC3.73□□□□□ -1.81
XPAP23025 RPL23AP45-201ENST00000476406 468 ntBASIC3.73□□□□□ -1.81
XPAP23025 AC022493.2-201ENST00000506122 481 ntBASIC3.73□□□□□ -1.81
XPAP23025 Y_RNA.661-201ENST00000516003 99 ntBASIC3.73□□□□□ -1.81
XPAP23025 RNU6-988P-201ENST00000519081 107 ntBASIC3.73□□□□□ -1.81
XPAP23025 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.73□□□□□ -1.81
XPAP23025 AL360157.1-201ENST00000565962 87 ntBASIC3.73□□□□□ -1.81
XPAP23025 AC109446.1-201ENST00000566172 220 ntBASIC3.73□□□□□ -1.81
XPAP23025 BNIP3P16-201ENST00000589779 534 ntBASIC3.73□□□□□ -1.81
XPAP23025 BRDTP1-201ENST00000605735 677 ntBASIC3.73□□□□□ -1.81
XPAP23025 MIR3976-201ENST00000606807 139 ntBASIC3.73□□□□□ -1.81
XPAP23025 AC039056.2-201ENST00000622261 511 ntBASIC3.73□□□□□ -1.81
XPAP23025 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 AL359693.1-201ENST00000614959 2407 ntBASIC3.73□□□□□ -1.81
XPAP23025 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
XPAP23025 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
XPAP23025 CEP170P1-201ENST00000502249 4587 ntBASIC3.72□□□□□ -1.81
XPAP23025 RNU6-827P-201ENST00000365553 106 ntBASIC3.72□□□□□ -1.81
XPAP23025 RNU6-639P-201ENST00000384074 107 ntBASIC3.72□□□□□ -1.81
XPAP23025 SNORA5A-201ENST00000384111 134 ntBASIC3.72□□□□□ -1.81
XPAP23025 RNU6-790P-201ENST00000384479 105 ntBASIC3.72□□□□□ -1.81
XPAP23025 MIR670-201ENST00000390142 98 ntBASIC3.72□□□□□ -1.81
XPAP23025 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 MCFD2P1-201ENST00000417812 300 ntBASIC3.72□□□□□ -1.81
XPAP23025 AC098614.2-201ENST00000426040 255 ntBASIC3.72□□□□□ -1.81
XPAP23025 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 AL159987.2-201ENST00000432754 307 ntBASIC3.72□□□□□ -1.81
XPAP23025 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.72□□□□□ -1.81
XPAP23025 AL078601.1-201ENST00000444542 271 ntBASIC3.72□□□□□ -1.81
XPAP23025 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.72□□□□□ -1.81
XPAP23025 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 AC008571.1-201ENST00000467232 300 ntBASIC3.72□□□□□ -1.81
XPAP23025 RN7SL330P-201ENST00000469709 307 ntBASIC3.72□□□□□ -1.81
XPAP23025 RPL30P5-201ENST00000494923 336 ntBASIC3.72□□□□□ -1.81
XPAP23025 SNORD59.2-201ENST00000516873 68 ntBASIC3.72□□□□□ -1.81
XPAP23025 MIR4429-201ENST00000580105 73 ntBASIC3.72□□□□□ -1.81
XPAP23025 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
XPAP23025 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.72□□□□□ -1.81
XPAP23025 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
XPAP23025 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
XPAP23025 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
XPAP23025 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
XPAP23025 FAM35DP-201ENST00000323387 2712 ntBASIC3.71□□□□□ -1.82
XPAP23025 MIR423-201ENST00000362201 94 ntBASIC3.71□□□□□ -1.82
XPAP23025 Y_RNA.48-201ENST00000362710 103 ntBASIC3.71□□□□□ -1.82
XPAP23025 Y_RNA.145-201ENST00000363527 102 ntBASIC3.71□□□□□ -1.82
XPAP23025 RNU6-1317P-201ENST00000364582 104 ntBASIC3.71□□□□□ -1.82
XPAP23025 RNU6-217P-201ENST00000384164 104 ntBASIC3.71□□□□□ -1.82
XPAP23025 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
XPAP23025 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.71□□□□□ -1.82
XPAP23025 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.71□□□□□ -1.82
XPAP23025 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
XPAP23025 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.71□□□□□ -1.82
XPAP23025 AC104619.4-201ENST00000510773 249 ntBASIC3.71□□□□□ -1.82
XPAP23025 SNORA31.1-201ENST00000515993 133 ntBASIC3.71□□□□□ -1.82
XPAP23025 SNORA31.5-201ENST00000516190 133 ntBASIC3.71□□□□□ -1.82
XPAP23025 RN7SKP209-201ENST00000516888 304 ntBASIC3.71□□□□□ -1.82
XPAP23025 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
XPAP23025 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
XPAP23025 AC103996.1-201ENST00000555468 102 ntBASIC3.71□□□□□ -1.82
XPAP23025 H3F3AP1-201ENST00000559984 334 ntBASIC3.71□□□□□ -1.82
XPAP23025 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.71□□□□□ -1.82
XPAP23025 MIR92B-201ENST00000607575 96 ntBASIC3.71□□□□□ -1.82
XPAP23025 FTX_3.1-201ENST00000610451 147 ntBASIC3.71□□□□□ -1.82
XPAP23025 AL161629.2-201ENST00000615347 275 ntBASIC3.71□□□□□ -1.82
XPAP23025 AC012442.3-202ENST00000636742 206 ntBASIC3.71□□□□□ -1.82
XPAP23025 U6.99-201ENST00000637524 83 ntBASIC3.71□□□□□ -1.82
XPAP23025 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
XPAP23025 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
XPAP23025 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
XPAP23025 AC093010.3-201ENST00000570269 15214 ntBASIC3.7□□□□□ -1.82
XPAP23025 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
XPAP23025 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
XPAP23025 Z98749.2-208ENST00000381646 500 ntBASIC3.7□□□□□ -1.82
XPAP23025 RNY1P14-201ENST00000384426 108 ntBASIC3.7□□□□□ -1.82
XPAP23025 RNU6-55P-201ENST00000411092 107 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms