Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC091167.4-201ENST00000605079 184 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC021753.1-201ENST00000635724 168 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AL592182.3-201ENST00000642132 3304 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 Z75746.1-201ENST00000440243 2080 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 RNA5SP22-201ENST00000365393 109 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 U8.8-201ENST00000365399 135 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 RNA5SP167-201ENST00000365461 116 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 MRPL35P1-201ENST00000404272 572 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AL592148.1-201ENST00000413568 445 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 COX6CP10-201ENST00000416832 224 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AL159987.2-201ENST00000432754 307 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AL645939.1-201ENST00000453429 797 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 S100A11P1-201ENST00000477525 312 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AC010469.2-201ENST00000496412 480 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 TRAV28-201ENST00000557548 323 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AC233702.9-201ENST00000581528 203 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 AC123912.5-201ENST00000605470 343 ntBASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CSB-PGBD3P0DP91 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 USP8P1-201ENST00000494673 3183 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 MARK2P15-201ENST00000432204 2186 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 MIR411-201ENST00000362239 96 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 Y_RNA.170-201ENST00000363746 110 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 Y_RNA.199-201ENST00000364014 102 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 RNU6-384P-201ENST00000364900 104 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 RNA5SP97-201ENST00000365006 84 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 RPL21P17-201ENST00000397467 475 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 AL513475.1-201ENST00000406602 315 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 RN7SKP177-201ENST00000410567 355 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 AC007098.1-201ENST00000420122 367 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 RPL23AP65-201ENST00000475608 468 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 AC025755.1-201ENST00000521306 278 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 AC024405.2-202ENST00000532731 184 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 AC087499.8-201ENST00000578406 226 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 MIR4300-201ENST00000581016 96 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 AC096577.2-201ENST00000611455 153 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 MIR376A1-201ENST00000616574 68 ntBASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.34□□□□□ -1.55
CSB-PGBD3P0DP91 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.34□□□□□ -1.56
CSB-PGBD3P0DP91 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 AC007785.2-201ENST00000598627 1916 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 SNORD81.1-201ENST00000363064 77 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 SNORA9-201ENST00000384215 133 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 AL591034.2-201ENST00000402839 359 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 HMGN2P31-201ENST00000432430 273 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 AC092573.2-201ENST00000434546 243 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 RPL21P13-201ENST00000488305 481 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 HMGN1P11-201ENST00000508668 303 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 AC074250.1-201ENST00000511117 192 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-346P-201ENST00000516288 111 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 RNU6-861P-201ENST00000516745 106 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 RNU7-143P-201ENST00000516781 65 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 SCARNA24.2-201ENST00000516968 130 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 RNA5SP165-201ENST00000517142 115 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 AL121917.1-203ENST00000605534 577 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 MIR432-201ENST00000606207 94 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 AC004832.4-201ENST00000608952 331 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.33□□□□□ -1.56
CSB-PGBD3P0DP91 ZNF299P-201ENST00000406845 1804 ntBASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.32□□□□□ -1.56
CSB-PGBD3P0DP91 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms