Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.05□□□□□ -2.24
UBBP0CG47 AL592045.1-201ENST00000429867 352 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 HMGB1P27-201ENST00000431429 603 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 AL354941.1-201ENST00000438600 464 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 AC079448.1-201ENST00000449377 373 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 RPS3AP22-201ENST00000488297 769 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
UBBP0CG47 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.05□□□□□ -2.24
UBBP0CG47 RPS3AP4-201ENST00000555161 764 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 PSMA3P-201ENST00000555485 635 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 MIR4422-201ENST00000581938 83 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 SNRPGP17-201ENST00000603780 214 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
UBBP0CG47 AC021646.1-201ENST00000605469 484 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 AL133445.2-201ENST00000611191 527 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 AL136313.1-201ENST00000624804 202 ntBASIC1.05□□□□□ -2.24
UBBP0CG47 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.05□□□□□ -2.24
UBBP0CG47 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
UBBP0CG47 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.05□□□□□ -2.24
UBBP0CG47 RNU6-560P-201ENST00000364007 108 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 SNORA75B-201ENST00000384053 137 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
UBBP0CG47 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.04□□□□□ -2.24
UBBP0CG47 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.04□□□□□ -2.24
UBBP0CG47 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.04□□□□□ -2.24
UBBP0CG47 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.04□□□□□ -2.24
UBBP0CG47 AL590365.1-201ENST00000450788 243 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 FCF1P6-201ENST00000456841 595 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 SNORD97-201ENST00000459187 142 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AC006512.1-201ENST00000468816 291 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.04□□□□□ -2.24
UBBP0CG47 RNU6-667P-201ENST00000517186 102 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 RRN3P3-201ENST00000549207 578 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.04□□□□□ -2.24
UBBP0CG47 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.04□□□□□ -2.24
UBBP0CG47 AC093249.1-201ENST00000567049 203 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.04□□□□□ -2.24
UBBP0CG47 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.04□□□□□ -2.24
UBBP0CG47 AC007363.1-201ENST00000604736 620 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AC116312.1-201ENST00000606841 314 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AC098614.4-201ENST00000607601 462 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.04□□□□□ -2.24
UBBP0CG47 AC013412.1-201ENST00000610687 192 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.04□□□□□ -2.24
UBBP0CG47 AL132822.1-201ENST00000617063 513 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AC126544.2-201ENST00000625174 749 ntBASIC1.04□□□□□ -2.24
UBBP0CG47 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.03□□□□□ -2.24
UBBP0CG47 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.03□□□□□ -2.24
UBBP0CG47 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 RNU6-1164P-201ENST00000364428 107 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 RNU6-1280P-201ENST00000365211 107 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
UBBP0CG47 Y_RNA.472-201ENST00000384322 102 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 RNU1-57P-201ENST00000384491 166 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
UBBP0CG47 RNU6-817P-201ENST00000391083 104 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 RNU1-78P-201ENST00000391248 165 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 RPL17P50-201ENST00000396131 546 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 FTH1P15-201ENST00000406984 280 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 MTCO1P17-201ENST00000411522 491 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AL359704.1-201ENST00000411586 781 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.03□□□□□ -2.24
UBBP0CG47 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AL022400.1-201ENST00000423946 935 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.03□□□□□ -2.24
UBBP0CG47 MTND5P25-201ENST00000430499 799 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AL513124.1-201ENST00000450410 614 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.03□□□□□ -2.24
UBBP0CG47 AC079395.1-201ENST00000510981 262 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
UBBP0CG47 RNU6-572P-201ENST00000516724 80 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 SNORA31.19-201ENST00000517079 126 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.03□□□□□ -2.24
UBBP0CG47 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.03□□□□□ -2.24
UBBP0CG47 BNIP3P26-201ENST00000600827 554 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AC025811.1-201ENST00000604312 472 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AC073413.2-201ENST00000604332 360 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 BCRP9-201ENST00000605312 388 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AC112220.2-201ENST00000605513 533 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 AC245297.2-201ENST00000610119 565 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 U6.99-201ENST00000637524 83 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.03□□□□□ -2.24
UBBP0CG47 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.03□□□□□ -2.24
UBBP0CG47 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.03□□□□□ -2.24
UBBP0CG47 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
UBBP0CG47 ZNF680P1-201ENST00000436625 1469 ntBASIC1.03□□□□□ -2.24
UBBP0CG47 Y_RNA.311-201ENST00000365068 96 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 RNU6-166P-201ENST00000384371 107 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 RNU6-1274P-201ENST00000384557 107 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.02□□□□□ -2.25
UBBP0CG47 AC083875.1-201ENST00000419509 405 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.02□□□□□ -2.25
UBBP0CG47 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.02□□□□□ -2.25
UBBP0CG47 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.02□□□□□ -2.25
UBBP0CG47 LARP1BP3-201ENST00000437229 869 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.02□□□□□ -2.25
UBBP0CG47 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms