Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TRAV32-201ENST00000553993 340 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 AC021171.1-201ENST00000603137 706 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 AC034229.4-201ENST00000607861 441 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 OR4G3P-201ENST00000633500 913 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 U6.101-201ENST00000637707 76 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HMGN1P05114 AC119751.3-201ENST00000399720 670 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 CYCSP33-201ENST00000414485 327 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AL022400.1-201ENST00000423946 935 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.64□□□□□ -2.31
HMGN1P05114 UBE2V1P8-201ENST00000437166 265 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 RAD1P2-201ENST00000446414 663 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN1P05114 AC013828.1-201ENST00000481845 158 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 RNU6-885P-201ENST00000516607 104 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 RNU6-113P-201ENST00000516653 101 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 RNA5SP135-201ENST00000517019 125 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.64□□□□□ -2.31
HMGN1P05114 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.64□□□□□ -2.31
HMGN1P05114 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AC022387.2-201ENST00000604050 448 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AL118556.2-201ENST00000614375 824 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AC009033.1-201ENST00000624279 431 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 AC080188.3-201ENST00000624842 748 ntBASIC0.64□□□□□ -2.31
HMGN1P05114 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.64□□□□□ -2.31
HMGN1P05114 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HMGN1P05114 RNU6-392P-201ENST00000364926 101 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 MIR222-201ENST00000384992 110 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
HMGN1P05114 RPL23AP32-201ENST00000395315 459 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 AC010153.1-201ENST00000432862 727 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.63□□□□□ -2.31
HMGN1P05114 NIFKP8-201ENST00000560500 874 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 AC093249.1-201ENST00000567049 203 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 AC008088.1-201ENST00000580993 280 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 AL355802.4-201ENST00000607635 548 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 AC096772.1-201ENST00000609146 564 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 AC002550.2-201ENST00000621246 394 ntBASIC0.63□□□□□ -2.31
HMGN1P05114 MTND4P16-201ENST00000466108 1367 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 RNU6-1280P-201ENST00000365211 107 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.62□□□□□ -2.31
HMGN1P05114 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.62□□□□□ -2.31
HMGN1P05114 AL589872.1-201ENST00000426602 288 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGN1P05114 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.62□□□□□ -2.31
HMGN1P05114 RPL30P1-201ENST00000488676 339 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 RNU5B-3P-201ENST00000516601 115 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 AC108706.1-201ENST00000611053 297 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 AL133445.2-201ENST00000611191 527 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 AL596245.1-201ENST00000618994 362 ntBASIC0.62□□□□□ -2.31
HMGN1P05114 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGN1P05114 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HMGN1P05114 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN1P05114 NACAP2-201ENST00000318548 624 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN1P05114 FGF7P8-201ENST00000402994 292 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 AL117342.1-201ENST00000404861 406 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN1P05114 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN1P05114 RAP1BP2-201ENST00000478270 544 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.61□□□□□ -2.31
HMGN1P05114 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.61□□□□□ -2.31
HMGN1P05114 RNU6-197P-201ENST00000516680 100 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.61□□□□□ -2.31
HMGN1P05114 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN1P05114 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGN1P05114 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.61□□□□□ -2.31
HMGN1P05114 AC091057.3-201ENST00000602684 733 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 MZT1P2-201ENST00000604387 248 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 AC090970.3-201ENST00000612566 866 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGN1P05114 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HMGN1P05114 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HMGN1P05114 MTND5P35-201ENST00000557537 1720 ntBASIC0.61□□□□□ -2.31
HMGN1P05114 MTND5P11-201ENST00000511037 1812 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 AL161781.1-201ENST00000354277 403 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 RNU6-112P-201ENST00000363599 104 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.6□□□□□ -2.31
HMGN1P05114 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
HMGN1P05114 SNORA18.2-201ENST00000383865 132 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 RNU6-637P-201ENST00000384050 107 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 RNU6-40P-201ENST00000384254 107 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
HMGN1P05114 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGN1P05114 RAC1P8-201ENST00000427086 527 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 TRIM60P13-201ENST00000432350 1283 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 OR2AQ1P-201ENST00000451972 200 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 AC116655.1-201ENST00000508324 901 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 AC008628.1-201ENST00000508663 265 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGN1P05114 AC010460.2-201ENST00000509054 677 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.6□□□□□ -2.31
HMGN1P05114 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGN1P05114 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.6□□□□□ -2.31
HMGN1P05114 AP000907.2-201ENST00000530827 353 ntBASIC0.6□□□□□ -2.31
HMGN1P05114 AL512310.8-201ENST00000550183 120 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms