Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.02□□□□□ -2.41
APOBP04114 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.02□□□□□ -2.41
APOBP04114 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.02□□□□□ -2.41
APOBP04114 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.02□□□□□ -2.41
APOBP04114 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.02□□□□□ -2.41
APOBP04114 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.02□□□□□ -2.41
APOBP04114 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
APOBP04114 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
APOBP04114 Y_RNA.413-201ENST00000384007 102 ntBASIC0.02□□□□□ -2.41
APOBP04114 RNU6-30P-201ENST00000384561 107 ntBASIC0.02□□□□□ -2.41
APOBP04114 MIR608-201ENST00000384820 100 ntBASIC0.02□□□□□ -2.41
APOBP04114 AL034374.1-201ENST00000406329 351 ntBASIC0.02□□□□□ -2.41
APOBP04114 MIR1302-8-201ENST00000408342 128 ntBASIC0.02□□□□□ -2.41
APOBP04114 PAXBP1P1-201ENST00000449315 447 ntBASIC0.02□□□□□ -2.41
APOBP04114 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.02□□□□□ -2.41
APOBP04114 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.02□□□□□ -2.41
APOBP04114 Y_RNA.754-201ENST00000476024 102 ntBASIC0.02□□□□□ -2.41
APOBP04114 RN7SKP12-201ENST00000516275 143 ntBASIC0.02□□□□□ -2.41
APOBP04114 RNU7-40P-201ENST00000516397 64 ntBASIC0.02□□□□□ -2.41
APOBP04114 AC034114.1-201ENST00000520293 285 ntBASIC0.02□□□□□ -2.41
APOBP04114 OR8K4P-201ENST00000534608 872 ntBASIC0.02□□□□□ -2.41
APOBP04114 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.02□□□□□ -2.41
APOBP04114 AC002545.1-201ENST00000592511 181 ntBASIC0.02□□□□□ -2.41
APOBP04114 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.02□□□□□ -2.41
APOBP04114 Y_RNA.790-201ENST00000614282 102 ntBASIC0.02□□□□□ -2.41
APOBP04114 Y_RNA.782-201ENST00000614695 102 ntBASIC0.02□□□□□ -2.41
APOBP04114 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.02□□□□□ -2.41
APOBP04114 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
APOBP04114 RNU6-251P-201ENST00000363235 104 ntBASIC0.02□□□□□ -2.41
APOBP04114 MIR320B1-201ENST00000390209 79 ntBASIC0.02□□□□□ -2.41
APOBP04114 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
APOBP04114 U6atac.2-201ENST00000408644 118 ntBASIC0.02□□□□□ -2.41
APOBP04114 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.02□□□□□ -2.41
APOBP04114 ELOCP11-201ENST00000436690 332 ntBASIC0.02□□□□□ -2.41
APOBP04114 ELOCP16-201ENST00000444494 332 ntBASIC0.02□□□□□ -2.41
APOBP04114 PNPLA4P1-201ENST00000458328 305 ntBASIC0.02□□□□□ -2.41
APOBP04114 AL133373.1-201ENST00000497098 94 ntBASIC0.02□□□□□ -2.41
APOBP04114 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.02□□□□□ -2.41
APOBP04114 IGKV1-22-201ENST00000524313 326 ntBASIC0.02□□□□□ -2.41
APOBP04114 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.02□□□□□ -2.41
APOBP04114 AC073544.2-201ENST00000601155 540 ntBASIC0.02□□□□□ -2.41
APOBP04114 AC073410.2-201ENST00000603240 332 ntBASIC0.02□□□□□ -2.41
APOBP04114 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.02□□□□□ -2.41
APOBP04114 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
APOBP04114 HMGN2P22-201ENST00000427588 175 ntBASIC0.01□□□□□ -2.41
APOBP04114 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.01□□□□□ -2.41
APOBP04114 Y_RNA.644-201ENST00000459006 113 ntBASIC0.01□□□□□ -2.41
APOBP04114 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.01□□□□□ -2.41
APOBP04114 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.01□□□□□ -2.41
APOBP04114 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.01□□□□□ -2.41
APOBP04114 AC010738.1-201ENST00000604970 987 ntBASIC0.01□□□□□ -2.41
APOBP04114 AC069294.1-201ENST00000608397 350 ntBASIC0.01□□□□□ -2.41
APOBP04114 MIR411-201ENST00000362239 96 ntBASIC0.01□□□□□ -2.41
APOBP04114 Y_RNA.551-201ENST00000384661 102 ntBASIC0.01□□□□□ -2.41
APOBP04114 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.01□□□□□ -2.41
APOBP04114 AC007742.1-201ENST00000425789 329 ntBASIC0.01□□□□□ -2.41
APOBP04114 ELOCP26-201ENST00000436067 329 ntBASIC0.01□□□□□ -2.41
APOBP04114 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.01□□□□□ -2.41
APOBP04114 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.01□□□□□ -2.41
APOBP04114 AC005832.2-201ENST00000538921 1430 ntBASIC0.01□□□□□ -2.41
APOBP04114 MIR561-201ENST00000385216 97 ntBASIC0.01□□□□□ -2.41
APOBP04114 RNU2-36P-201ENST00000410361 191 ntBASIC0.01□□□□□ -2.41
APOBP04114 ISCA1P1-201ENST00000426679 387 ntBASIC0.01□□□□□ -2.41
APOBP04114 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.01□□□□□ -2.41
APOBP04114 AC004923.2-201ENST00000529649 369 ntBASIC0.01□□□□□ -2.41
APOBP04114 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.01□□□□□ -2.41
APOBP04114 DUXAP1-201ENST00000556632 463 ntBASIC0.01□□□□□ -2.41
APOBP04114 RNA5SP125-201ENST00000364843 120 ntBASIC0.01□□□□□ -2.41
APOBP04114 RNU4-78P-201ENST00000410940 126 ntBASIC0.01□□□□□ -2.41
APOBP04114 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.01□□□□□ -2.41
APOBP04114 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.01□□□□□ -2.41
APOBP04114 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.01□□□□□ -2.41
APOBP04114 AP001330.4-201ENST00000604350 154 ntBASIC0.01□□□□□ -2.41
APOBP04114 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.01□□□□□ -2.41
APOBP04114 Pinc.1-201ENST00000616452 154 ntBASIC0.01□□□□□ -2.41
APOBP04114 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0□□□□□ -2.41
APOBP04114 U3.13-201ENST00000364804 214 ntBASIC0□□□□□ -2.41
APOBP04114 RNU6-26P-201ENST00000383985 107 ntBASIC0□□□□□ -2.41
APOBP04114 RPS26P5-201ENST00000418544 335 ntBASIC0□□□□□ -2.41
APOBP04114 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0□□□□□ -2.41
APOBP04114 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0□□□□□ -2.41
APOBP04114 UBE2V1P8-201ENST00000437166 265 ntBASIC0□□□□□ -2.41
APOBP04114 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0□□□□□ -2.41
APOBP04114 AF213884.2-201ENST00000510417 903 ntBASIC0□□□□□ -2.41
APOBP04114 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0□□□□□ -2.41
APOBP04114 AC115085.1-201ENST00000588924 229 ntBASIC0□□□□□ -2.41
APOBP04114 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0□□□□□ -2.41
APOBP04114 AC093838.1-201ENST00000613014 469 ntBASIC0□□□□□ -2.41
APOBP04114 AC093677.1-201ENST00000514414 678 ntBASIC-0□□□□□ -2.41
APOBP04114 AC104417.1-201ENST00000523974 751 ntBASIC-0□□□□□ -2.41
APOBP04114 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0□□□□□ -2.41
APOBP04114 AP001596.2-201ENST00000608410 312 ntBASIC-0□□□□□ -2.41
APOBP04114 AC073308.1-201ENST00000623696 305 ntBASIC-0□□□□□ -2.41
APOBP04114 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC-0□□□□□ -2.41
APOBP04114 AC009950.2-201ENST00000636548 183 ntBASIC-0□□□□□ -2.41
APOBP04114 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC-0□□□□□ -2.41
APOBP04114 MTND5P30-201ENST00000452896 1731 ntBASIC-0□□□□□ -2.41
APOBP04114 RNA5SP98-201ENST00000363158 137 ntBASIC-0.01□□□□□ -2.41
APOBP04114 RNU6-1327P-201ENST00000365302 105 ntBASIC-0.01□□□□□ -2.41
APOBP04114 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms