Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.69□□□□□ -2.3
APOC1P02654 CALM1P1-201ENST00000442082 433 ntBASIC0.69□□□□□ -2.3
APOC1P02654 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.69□□□□□ -2.3
APOC1P02654 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.69□□□□□ -2.3
APOC1P02654 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.69□□□□□ -2.3
APOC1P02654 AC103833.1-201ENST00000517442 172 ntBASIC0.69□□□□□ -2.3
APOC1P02654 LINC00557-201ENST00000563184 1279 ntBASIC0.69□□□□□ -2.3
APOC1P02654 ADAM3B-201ENST00000569937 840 ntBASIC0.69□□□□□ -2.3
APOC1P02654 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.69□□□□□ -2.3
APOC1P02654 AP005136.1-201ENST00000579765 429 ntBASIC0.69□□□□□ -2.3
APOC1P02654 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.69□□□□□ -2.3
APOC1P02654 VN1R107P-201ENST00000601784 209 ntBASIC0.69□□□□□ -2.3
APOC1P02654 AL390208.1-201ENST00000605885 644 ntBASIC0.69□□□□□ -2.3
APOC1P02654 AC099654.5-201ENST00000636479 350 ntBASIC0.69□□□□□ -2.3
APOC1P02654 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
APOC1P02654 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
APOC1P02654 RNU1-58P-201ENST00000362413 163 ntBASIC0.68□□□□□ -2.3
APOC1P02654 SNORD33-201ENST00000362761 85 ntBASIC0.68□□□□□ -2.3
APOC1P02654 SNORA48.1-201ENST00000390879 135 ntBASIC0.68□□□□□ -2.3
APOC1P02654 RPL22P22-201ENST00000395439 379 ntBASIC0.68□□□□□ -2.3
APOC1P02654 USP9YP33-201ENST00000412220 421 ntBASIC0.68□□□□□ -2.3
APOC1P02654 NCOR1P3-201ENST00000420479 303 ntBASIC0.68□□□□□ -2.3
APOC1P02654 AC139712.2-201ENST00000424302 339 ntBASIC0.68□□□□□ -2.3
APOC1P02654 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.68□□□□□ -2.3
APOC1P02654 AC244505.5-201ENST00000443639 207 ntBASIC0.68□□□□□ -2.3
APOC1P02654 MTCYBP11-201ENST00000447254 1109 ntBASIC0.68□□□□□ -2.3
APOC1P02654 RPL7P43-201ENST00000478876 753 ntBASIC0.68□□□□□ -2.3
APOC1P02654 AC091860.1-201ENST00000505723 432 ntBASIC0.68□□□□□ -2.3
APOC1P02654 ARL2BPP4-201ENST00000506854 471 ntBASIC0.68□□□□□ -2.3
APOC1P02654 AC010460.2-201ENST00000509054 677 ntBASIC0.68□□□□□ -2.3
APOC1P02654 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
APOC1P02654 SNORD116-28-201ENST00000516123 91 ntBASIC0.68□□□□□ -2.3
APOC1P02654 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.68□□□□□ -2.3
APOC1P02654 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.68□□□□□ -2.3
APOC1P02654 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.68□□□□□ -2.3
APOC1P02654 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.68□□□□□ -2.3
APOC1P02654 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.68□□□□□ -2.3
APOC1P02654 AC104229.1-201ENST00000561364 255 ntBASIC0.68□□□□□ -2.3
APOC1P02654 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.68□□□□□ -2.3
APOC1P02654 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.68□□□□□ -2.3
APOC1P02654 AC011451.2-201ENST00000604303 598 ntBASIC0.68□□□□□ -2.3
APOC1P02654 AC008945.2-201ENST00000606056 604 ntBASIC0.68□□□□□ -2.3
APOC1P02654 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
APOC1P02654 AL132822.1-201ENST00000617063 513 ntBASIC0.68□□□□□ -2.3
APOC1P02654 RNU6-414P-201ENST00000363705 104 ntBASIC0.67□□□□□ -2.3
APOC1P02654 RNU6-343P-201ENST00000364709 104 ntBASIC0.67□□□□□ -2.3
APOC1P02654 SNORA18.2-201ENST00000383865 132 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.67□□□□□ -2.3
APOC1P02654 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.67□□□□□ -2.3
APOC1P02654 VN1R42P-201ENST00000424651 344 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.67□□□□□ -2.3
APOC1P02654 AL121578.1-201ENST00000428051 892 ntBASIC0.67□□□□□ -2.3
APOC1P02654 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.67□□□□□ -2.3
APOC1P02654 AC005840.1-201ENST00000498412 377 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AC008628.1-201ENST00000508663 265 ntBASIC0.67□□□□□ -2.3
APOC1P02654 PTP4A1P4-201ENST00000512479 322 ntBASIC0.67□□□□□ -2.3
APOC1P02654 ACA59.2-201ENST00000517061 156 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AP003392.2-201ENST00000527269 208 ntBASIC0.67□□□□□ -2.3
APOC1P02654 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
APOC1P02654 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.67□□□□□ -2.3
APOC1P02654 AP000763.2-201ENST00000540641 163 ntBASIC0.67□□□□□ -2.3
APOC1P02654 PSMA3P-201ENST00000555485 635 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AC093249.1-201ENST00000567049 203 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AP001004.1-201ENST00000582468 324 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AC004908.3-201ENST00000610248 625 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AC008759.3-201ENST00000613300 508 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AL133216.2-202ENST00000634512 349 ntBASIC0.67□□□□□ -2.3
APOC1P02654 AC132825.7-201ENST00000638744 335 ntBASIC0.67□□□□□ -2.3
APOC1P02654 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
APOC1P02654 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
APOC1P02654 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
APOC1P02654 RNU6-492P-201ENST00000363035 104 ntBASIC0.66□□□□□ -2.3
APOC1P02654 RNU6-353P-201ENST00000364266 108 ntBASIC0.66□□□□□ -2.3
APOC1P02654 Y_RNA.234-201ENST00000364409 97 ntBASIC0.66□□□□□ -2.3
APOC1P02654 RNU6-14P-201ENST00000384630 106 ntBASIC0.66□□□□□ -2.3
APOC1P02654 MIR506-201ENST00000384998 124 ntBASIC0.66□□□□□ -2.3
APOC1P02654 RNU6-321P-201ENST00000410912 106 ntBASIC0.66□□□□□ -2.3
APOC1P02654 TPMTP3-201ENST00000411928 735 ntBASIC0.66□□□□□ -2.3
APOC1P02654 AC009518.2-201ENST00000418056 731 ntBASIC0.66□□□□□ -2.3
APOC1P02654 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.66□□□□□ -2.3
APOC1P02654 RPL39P6-201ENST00000448289 150 ntBASIC0.66□□□□□ -2.3
APOC1P02654 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.66□□□□□ -2.3
APOC1P02654 RPL21P47-201ENST00000483696 477 ntBASIC0.66□□□□□ -2.3
APOC1P02654 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.66□□□□□ -2.3
APOC1P02654 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.66□□□□□ -2.3
APOC1P02654 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.66□□□□□ -2.3
APOC1P02654 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.66□□□□□ -2.3
APOC1P02654 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.66□□□□□ -2.3
APOC1P02654 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.66□□□□□ -2.3
APOC1P02654 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.66□□□□□ -2.3
APOC1P02654 AC233266.2-201ENST00000567067 528 ntBASIC0.66□□□□□ -2.3
APOC1P02654 RPL30P11-203ENST00000598995 310 ntBASIC0.66□□□□□ -2.3
APOC1P02654 Z82243.1-201ENST00000609432 473 ntBASIC0.66□□□□□ -2.3
APOC1P02654 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.66□□□□□ -2.3
APOC1P02654 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
APOC1P02654 MIR337-201ENST00000362281 93 ntBASIC0.65□□□□□ -2.31
APOC1P02654 RNU6-637P-201ENST00000384050 107 ntBASIC0.65□□□□□ -2.31
APOC1P02654 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
APOC1P02654 CYCSP33-201ENST00000414485 327 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms