Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS4BO75351 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS4BO75351 AL645944.1-201ENST00000603857 493 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 AC005034.5-201ENST00000604219 466 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 ELOCP5-201ENST00000604924 333 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 FTX_3.1-201ENST00000610451 147 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 ATP5A1P2-202ENST00000616464 443 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS4BO75351 AC022149.2-201ENST00000621061 203 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS4BO75351 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VPS4BO75351 AL365361.1-201ENST00000566942 3481 ntBASIC3.49□□□□□ -1.85
VPS4BO75351 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS4BO75351 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS4BO75351 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS4BO75351 MFSD8-233ENST00000641482 4860 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS4BO75351 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS4BO75351 FTLP6-201ENST00000355274 422 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
VPS4BO75351 RNU6-474P-201ENST00000384243 107 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 RNU6-140P-201ENST00000384566 108 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 MIR325-201ENST00000385260 98 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 AP000567.1-201ENST00000406413 156 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS4BO75351 AL353729.1-201ENST00000425044 720 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4BO75351 AL512844.2-201ENST00000433990 593 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 FTH1P25-201ENST00000447665 469 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS4BO75351 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS4BO75351 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4BO75351 SNORD5.1-201ENST00000458800 75 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 AC084357.1-201ENST00000473404 255 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 MTCYBP40-201ENST00000509390 1135 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS4BO75351 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS4BO75351 SNRPGP17-201ENST00000603780 214 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 NUTF2P8-201ENST00000604593 363 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 AC018462.2-201ENST00000605375 395 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 Z69720.2-201ENST00000624755 279 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS4BO75351 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
VPS4BO75351 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
VPS4BO75351 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS4BO75351 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 KPNA2P1-201ENST00000458289 1591 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VPS4BO75351 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
VPS4BO75351 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS4BO75351 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
VPS4BO75351 AL590004.1-201ENST00000405321 300 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 RPL5P18-201ENST00000406671 891 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS4BO75351 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS4BO75351 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4BO75351 AC098614.2-201ENST00000426040 255 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS4BO75351 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS4BO75351 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4BO75351 RPL21P23-201ENST00000446654 460 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AL583843.1-201ENST00000456070 346 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 SNORD105B-201ENST00000458770 79 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 Y_RNA.653-201ENST00000459091 95 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 RN7SL594P-201ENST00000470590 287 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS4BO75351 AC096576.1-201ENST00000489014 359 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4BO75351 RNU1-61P-201ENST00000516107 151 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 SNORA70.19-201ENST00000516717 90 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 SNORA31.19-201ENST00000517079 126 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AP003072.1-201ENST00000531740 145 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 SYF2P1-201ENST00000550658 413 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AL121821.2-201ENST00000556081 394 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4BO75351 OR1M4P-201ENST00000589199 287 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AP000787.2-201ENST00000604432 568 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AC080078.3-201ENST00000605407 463 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AC123912.5-201ENST00000605470 343 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AP000654.2-201ENST00000605633 586 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 RNU1-30P-201ENST00000606575 163 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AL161423.1-201ENST00000613700 262 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 MIR6128-201ENST00000615528 109 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AC092628.2-201ENST00000622492 339 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AC027309.3-201ENST00000623419 351 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
VPS4BO75351 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS4BO75351 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS4BO75351 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VPS4BO75351 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VPS4BO75351 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms