Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FAM27B-201ENST00000610601 213 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.3□□□□□ -1.56
ACTN4O43707 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.3□□□□□ -1.56
ACTN4O43707 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.3□□□□□ -1.56
ACTN4O43707 AF127577.6-201ENST00000623352 2191 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 ZFRP1-201ENST00000457579 2970 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
ACTN4O43707 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTN4O43707 MAPK10-349ENST00000641767 3661 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 SCN1A-220ENST00000641603 12506 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 SNORA74A-201ENST00000364089 198 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 RNU4-10P-201ENST00000364383 140 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 RNU1-140P-201ENST00000365040 165 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 SNORA8.3-201ENST00000384679 139 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 MIR626-201ENST00000385032 94 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.29□□□□□ -1.56
ACTN4O43707 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.29□□□□□ -1.56
ACTN4O43707 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.29□□□□□ -1.56
ACTN4O43707 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.29□□□□□ -1.56
ACTN4O43707 RNA5SP228-201ENST00000516232 133 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 IGLV2-28-201ENST00000520681 304 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 HSPE1P4-201ENST00000550617 308 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.29□□□□□ -1.56
ACTN4O43707 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.29□□□□□ -1.56
ACTN4O43707 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.29□□□□□ -1.56
ACTN4O43707 MIR3921-201ENST00000577308 85 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 U7.2-201ENST00000607576 63 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 AL078604.3-201ENST00000615580 211 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.29□□□□□ -1.56
ACTN4O43707 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTN4O43707 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.29□□□□□ -1.56
ACTN4O43707 AC000123.3-201ENST00000624029 4975 ntBASIC5.29□□□□□ -1.56
ACTN4O43707 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTN4O43707 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ACTN4O43707 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ACTN4O43707 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTN4O43707 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTN4O43707 Y_RNA.293-201ENST00000364908 93 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ACTN4O43707 AL512633.1-201ENST00000399931 655 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.28□□□□□ -1.56
ACTN4O43707 RPL23AP27-201ENST00000415161 451 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 RPL21P66-201ENST00000426566 466 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 snoU13.6-201ENST00000458785 104 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 RN7SL515P-201ENST00000463999 297 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 RN7SL177P-201ENST00000476596 299 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 RNU6-168P-201ENST00000516189 101 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 RNU1-6P-201ENST00000516290 144 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 RNU6-1007P-201ENST00000516586 107 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 Y_RNA.712-201ENST00000517011 92 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 AC005255.1-201ENST00000593748 216 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 AC006380.1-201ENST00000603598 186 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 AC087385.3-201ENST00000620477 187 ntBASIC5.28□□□□□ -1.56
ACTN4O43707 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTN4O43707 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.28□□□□□ -1.56
ACTN4O43707 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ACTN4O43707 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ACTN4O43707 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTN4O43707 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
ACTN4O43707 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTN4O43707 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTN4O43707 AC139713.2-215ENST00000641428 5037 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ACTN4O43707 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTN4O43707 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTN4O43707 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTN4O43707 RNA5SP191-201ENST00000362585 102 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 RNA5SP507-201ENST00000363603 121 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 RNU6-324P-201ENST00000363957 106 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 RNU6-1180P-201ENST00000364935 107 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 RNU6-356P-201ENST00000384140 107 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTN4O43707 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.27□□□□□ -1.57
ACTN4O43707 FTH1P6-201ENST00000430768 320 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTN4O43707 RPL30P12-201ENST00000474666 353 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 AC016632.1-201ENST00000503994 196 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.27□□□□□ -1.57
ACTN4O43707 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTN4O43707 HMGN2P6-201ENST00000551091 273 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 AC023043.3-201ENST00000593113 385 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 AC013791.1-201ENST00000616619 62 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.27□□□□□ -1.57
ACTN4O43707 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
ACTN4O43707 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTN4O43707 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTN4O43707 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTN4O43707 NEAT1-202ENST00000501122 22743 ntBASIC5.26□□□□□ -1.57
ACTN4O43707 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ACTN4O43707 AC099654.7-201ENST00000635788 2127 ntBASIC5.26□□□□□ -1.57
ACTN4O43707 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.26□□□□□ -1.57
ACTN4O43707 RNU6-407P-201ENST00000365280 104 ntBASIC5.26□□□□□ -1.57
ACTN4O43707 SNORA36A-201ENST00000384221 132 ntBASIC5.26□□□□□ -1.57
ACTN4O43707 MIR921-201ENST00000401133 56 ntBASIC5.26□□□□□ -1.57
ACTN4O43707 RNA5SP475-201ENST00000410568 110 ntBASIC5.26□□□□□ -1.57
ACTN4O43707 ELOCP21-201ENST00000412558 336 ntBASIC5.26□□□□□ -1.57
ACTN4O43707 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.26□□□□□ -1.57
ACTN4O43707 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms