Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6-582P-201ENST00000362989 107 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-110P-201ENST00000384508 104 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-160P-201ENST00000384591 107 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR508-201ENST00000384857 115 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR222-201ENST00000384992 110 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR10B-201ENST00000385011 110 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC004941.2-201ENST00000427009 228 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC093422.3-201ENST00000428506 305 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 MTND2P21-201ENST00000436242 1042 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 HSPE1P9-201ENST00000440046 311 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 MTND3P4-201ENST00000453537 303 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 MTND1P16-201ENST00000465177 898 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC093259.1-201ENST00000509755 300 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-927P-201ENST00000516199 100 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 RNA5SP503-201ENST00000517047 117 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 VN1R107P-201ENST00000601784 209 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC011451.2-201ENST00000604303 598 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC096586.1-201ENST00000610267 561 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AL133445.2-201ENST00000611191 527 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC104465.1-201ENST00000611365 139 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 AC002550.2-201ENST00000621246 394 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 FARSBP1-201ENST00000435808 1778 ntBASIC0.26□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR548B-201ENST00000385247 97 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 UBE2V1P11-201ENST00000411559 285 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 RPS3AP1-201ENST00000413190 320 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 RPS15AP12-201ENST00000419498 388 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC244023.1-201ENST00000426884 112 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AL365400.1-201ENST00000431854 640 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 FDX1P2-201ENST00000450769 375 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 OR6C5P-201ENST00000452388 923 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 TRBV12-1-201ENST00000479785 344 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC074344.1-201ENST00000512823 224 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 SNORA70.22-201ENST00000517160 124 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC090502.2-201ENST00000549267 280 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC012065.4-201ENST00000602445 679 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC242498.1-201ENST00000604134 111 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AL365434.2-201ENST00000607979 234 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AP001596.2-201ENST00000608410 312 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC012360.2-201ENST00000609349 391 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AL590240.4-201ENST00000616908 390 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC243994.1-201ENST00000618627 109 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 AC020763.5-201ENST00000623298 430 ntBASIC0.25□□□□□ -2.37
CHKB-CPT1BH3BT56 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 Y_RNA.548-201ENST00000384656 105 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 MIR483-201ENST00000385070 76 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC114737.2-201ENST00000421583 173 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 CETN4P-201ENST00000432407 469 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AL358794.1-201ENST00000445689 381 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC130509.1-201ENST00000464158 433 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 COX6CP14-201ENST00000469580 174 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 UBE2DNL-203ENST00000474922 222 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 MTND4P2-201ENST00000507767 1203 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU2-53P-201ENST00000516257 147 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-885P-201ENST00000516607 104 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 RNA5SP168-201ENST00000516642 112 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 SNORA31.16-201ENST00000516773 139 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 RNA5SP135-201ENST00000517019 125 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-1183P-201ENST00000517054 60 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC133485.1-201ENST00000567176 124 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC138907.6-201ENST00000568401 126 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC073410.2-201ENST00000603240 332 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 AC068647.2-201ENST00000637380 353 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 U6.101-201ENST00000637707 76 ntBASIC0.24□□□□□ -2.37
CHKB-CPT1BH3BT56 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 SNORD114-19-201ENST00000363072 75 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 RNU6-1280P-201ENST00000365211 107 ntBASIC0.23□□□□□ -2.37
CHKB-CPT1BH3BT56 Y_RNA.333-201ENST00000365274 102 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms