Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 RNU5E-6P-201ENST00000365574 115 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 RNU6-1083P-201ENST00000384022 107 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 RNU6-1042P-201ENST00000384204 107 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 MTCO3P40-201ENST00000392516 676 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 RNU2-68P-201ENST00000410878 191 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 RPL26P27-201ENST00000414397 437 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRIM49BA6NDI0 HMGB1P27-201ENST00000431429 603 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 FDX1P2-201ENST00000450769 375 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 RPS29P15-201ENST00000458329 171 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC092989.1-201ENST00000481235 277 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC098591.2-201ENST00000510152 315 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC009646.1-201ENST00000510455 318 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AL117351.2-201ENST00000513571 157 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 RN7SKP258-201ENST00000517151 304 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 AP006587.4-201ENST00000526053 529 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AP001646.1-201ENST00000527936 915 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC010889.1-201ENST00000566193 2666 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 MIR5583-1-201ENST00000580941 59 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 MIR3682-201ENST00000581338 84 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC008752.3-201ENST00000588113 712 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 AL355598.1-201ENST00000604169 202 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AP002360.4-201ENST00000606980 481 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC004520.1-201ENST00000608362 1413 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 AC090517.2-201ENST00000614966 680 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 AL359880.1-201ENST00000621879 266 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.55□□□□□ -2
TRIM49BA6NDI0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM49BA6NDI0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRIM49BA6NDI0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM49BA6NDI0 SNORA62.1-201ENST00000364287 154 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 SNORD114-30-201ENST00000364448 72 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 RNU4-12P-201ENST00000365233 139 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 RNU1-73P-201ENST00000383971 164 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 SNORA24.1-201ENST00000384401 135 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM49BA6NDI0 AL139413.1-201ENST00000421309 217 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 CECR9-201ENST00000453421 199 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC069439.1-201ENST00000494739 167 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 RBBP4P6-201ENST00000508098 202 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 RNA5SP165-201ENST00000517142 115 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC087241.2-201ENST00000535801 324 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 NRBF2P1-201ENST00000587407 859 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC098848.2-201ENST00000588023 330 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC068944.2-201ENST00000610373 403 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC139792.3-201ENST00000623525 224 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC243829.7-201ENST00000633081 225 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRIM49BA6NDI0 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
TRIM49BA6NDI0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 ZNF680P1-201ENST00000436625 1469 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 MTND4P27-201ENST00000450813 1354 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM49BA6NDI0 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 RNU6-288P-201ENST00000363690 104 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 RNU6-641P-201ENST00000384006 107 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 MIR558-201ENST00000384920 94 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM49BA6NDI0 RPS3AP44-201ENST00000425466 790 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 GPM6BP2-201ENST00000432046 144 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 GPM6BP1-201ENST00000446387 144 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC006512.1-201ENST00000468816 291 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 RPS27AP10-201ENST00000496103 208 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 AC026801.1-201ENST00000497178 464 ntBASIC2.53□□□□□ -2
TRIM49BA6NDI0 HMGB1P29-201ENST00000505659 499 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms