Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CYCSP35-201ENST00000451978 304 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RNU7-169P-201ENST00000459456 61 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RPS26P28-201ENST00000470806 348 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC022795.1-201ENST00000473808 480 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 GZMAP1-201ENST00000503054 631 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 Y_RNA.673-201ENST00000516306 88 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RNA5SP164-201ENST00000516533 110 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RNA5SP471-201ENST00000516971 106 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 RNU6-111P-201ENST00000517179 105 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC091144.1-201ENST00000519573 138 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC009779.6-201ENST00000603972 165 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AL161798.1-201ENST00000604630 131 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC004852.3-201ENST00000614131 326 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 AC007390.2-201ENST00000606229 3803 ntBASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.03□□□□□ -1.76
HCFC2Q9Y5Z7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
HCFC2Q9Y5Z7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AP000560.1-201ENST00000624150 1937 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.27-201ENST00000362540 103 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RNU5A-1-201ENST00000362698 116 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RNY1-201ENST00000364228 113 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.477-201ENST00000384352 108 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RNU2-71P-201ENST00000411395 189 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 SNORD56-201ENST00000413522 71 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RAC1P3-201ENST00000416129 580 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AC006517.1-201ENST00000480485 328 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RPL21P13-201ENST00000488305 481 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RPS23P5-201ENST00000495419 428 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RNU5B-3P-201ENST00000516601 115 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 RNU1-30P-201ENST00000606575 163 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.02□□□□□ -1.77
HCFC2Q9Y5Z7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 DEFB108F-201ENST00000344638 222 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-384P-201ENST00000364900 104 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-1203P-201ENST00000410703 110 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 RNU2-25P-201ENST00000411041 191 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 EI24P1-201ENST00000416584 867 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AL117339.3-201ENST00000418733 162 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AL158156.1-201ENST00000422509 473 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC092423.1-201ENST00000430165 186 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 RPS20P22-201ENST00000473700 357 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-397P-201ENST00000516226 104 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.713-201ENST00000517013 96 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-789P-201ENST00000517105 102 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC109479.2-201ENST00000517842 174 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 ATP5F1P5-201ENST00000526403 760 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC107016.1-201ENST00000550463 337 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC009314.1-201ENST00000603871 304 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC006077.1-201ENST00000604746 343 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AP001282.2-201ENST00000616149 309 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 MIR6715B-201ENST00000637172 77 ntBASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCFC2Q9Y5Z7 AC007685.1-201ENST00000329806 452 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 Y_RNA.180-201ENST00000363867 113 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 MIR514A1-201ENST00000385133 98 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 LAP3P1-201ENST00000403648 294 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 MIR548M-201ENST00000408260 86 ntBASIC4□□□□□ -1.77
HCFC2Q9Y5Z7 RNU6-121P-201ENST00000410525 99 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms