Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC112220.1-201ENST00000434628 355 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 AC005154.2-201ENST00000438110 379 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 CEACAMP7-201ENST00000444105 496 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 RPSAP50-201ENST00000481955 852 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 AC005921.1-201ENST00000510589 286 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 AC108706.1-201ENST00000611053 297 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 uc_338.18-201ENST00000615451 175 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 OR56B2P-202ENST00000641377 2453 ntBASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHGA11Q9Y5H2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RNA5SP507-201ENST00000363603 121 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RNU6-873P-201ENST00000363833 107 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 MIR487A-201ENST00000385009 80 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RNA5SP390-201ENST00000410191 113 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RNA5SP146-201ENST00000410743 123 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC024067.1-201ENST00000426199 223 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RPS26P2-201ENST00000440331 348 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RPL23AP3-201ENST00000453844 468 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 RPL23AP56-201ENST00000460778 453 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC008953.1-201ENST00000497334 318 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AL512624.1-201ENST00000613638 469 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC091905.4-201ENST00000623432 202 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC048347.1-201ENST00000624621 427 ntBASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA11Q9Y5H2 AC073073.2-201ENST00000609827 2578 ntBASIC4.65□□□□□ -1.66
PCDHGA11Q9Y5H2 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA11Q9Y5H2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
PCDHGA11Q9Y5H2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
PCDHGA11Q9Y5H2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDHGA11Q9Y5H2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDHGA11Q9Y5H2 Y_RNA.179-201ENST00000363844 90 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 SNORA36A-201ENST00000384221 132 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 Y_RNA.498-201ENST00000384460 102 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-1248P-201ENST00000391096 64 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 AC114755.2-201ENST00000413520 361 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 FTH1P6-201ENST00000430768 320 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-625P-201ENST00000459412 107 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU5F-8P-201ENST00000515941 111 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 RNY3P16-201ENST00000516338 101 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 HMGN2P6-201ENST00000551091 273 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 AL591034.3-201ENST00000605511 685 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 AC110491.1-201ENST00000562191 2010 ntBASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
PCDHGA11Q9Y5H2 MTND5P35-201ENST00000557537 1720 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 RAD17P1-201ENST00000418130 2042 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU1-83P-201ENST00000363426 164 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 Y_RNA.217-201ENST00000364214 105 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 RNU6-1310P-201ENST00000384153 107 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 AC138623.1-201ENST00000418060 216 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 RPL39P29-201ENST00000447779 157 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 RPL26P9-201ENST00000457466 433 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 snoU13.6-201ENST00000458785 104 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 Y_RNA.641-201ENST00000459414 105 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 RPS23P7-201ENST00000466210 444 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 RNA5SP392-201ENST00000516905 112 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 MTND5P41-201ENST00000517498 206 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 AC011487.3-201ENST00000593607 453 ntBASIC4.64□□□□□ -1.67
PCDHGA11Q9Y5H2 AL022401.1-201ENST00000619498 108 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms